Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.35■□□□□ 0.37
SMSP52788 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMSP52788 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMSP52788 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SMSP52788 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC17.35■□□□□ 0.37
SMSP52788 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.35■□□□□ 0.37
SMSP52788 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMSP52788 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
SMSP52788 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
SMSP52788 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMSP52788 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.35■□□□□ 0.37
SMSP52788 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMSP52788 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC17.35■□□□□ 0.37
SMSP52788 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.35■□□□□ 0.37
SMSP52788 AC092647.4-201ENST00000457211 535 ntBASIC17.35■□□□□ 0.37
SMSP52788 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.35■□□□□ 0.37
SMSP52788 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.35■□□□□ 0.37
SMSP52788 FAM87A-204ENST00000613235 858 ntBASIC17.35■□□□□ 0.37
SMSP52788 AC011298.2-201ENST00000617989 482 ntBASIC17.35■□□□□ 0.37
SMSP52788 AC130371.2-201ENST00000619443 611 ntBASIC17.35■□□□□ 0.37
SMSP52788 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SMSP52788 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SMSP52788 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMSP52788 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SMSP52788 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.35■□□□□ 0.37
SMSP52788 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMSP52788 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMSP52788 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMSP52788 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMSP52788 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SMSP52788 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SMSP52788 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.34■□□□□ 0.37
SMSP52788 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.34■□□□□ 0.37
SMSP52788 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMSP52788 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.34■□□□□ 0.37
SMSP52788 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMSP52788 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SMSP52788 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMSP52788 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SMSP52788 RNF152P1-201ENST00000397754 604 ntBASIC17.34■□□□□ 0.37
SMSP52788 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
SMSP52788 AL354751.1-201ENST00000412768 1863 ntBASIC17.34■□□□□ 0.37
SMSP52788 AC004951.3-201ENST00000418645 1148 ntBASIC17.34■□□□□ 0.37
SMSP52788 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMSP52788 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.34■□□□□ 0.37
SMSP52788 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SMSP52788 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.34■□□□□ 0.37
SMSP52788 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMSP52788 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.34■□□□□ 0.37
SMSP52788 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.34■□□□□ 0.37
SMSP52788 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
SMSP52788 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SMSP52788 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
SMSP52788 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
SMSP52788 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.33■□□□□ 0.37
SMSP52788 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SMSP52788 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SMSP52788 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.33■□□□□ 0.37
SMSP52788 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMSP52788 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
SMSP52788 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SMSP52788 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
SMSP52788 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
SMSP52788 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMSP52788 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMSP52788 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMSP52788 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.33■□□□□ 0.37
SMSP52788 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMSP52788 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SMSP52788 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMSP52788 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SMSP52788 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SMSP52788 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 AC005332.8-201ENST00000622750 2735 ntBASIC17.33■□□□□ 0.36
SMSP52788 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.33■□□□□ 0.36
SMSP52788 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.33■□□□□ 0.36
SMSP52788 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.33■□□□□ 0.36
SMSP52788 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.33■□□□□ 0.36
SMSP52788 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC17.33■□□□□ 0.36
SMSP52788 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.33■□□□□ 0.36
SMSP52788 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
SMSP52788 AC083906.6-201ENST00000641366 219 ntBASIC17.33■□□□□ 0.36
SMSP52788 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SMSP52788 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SMSP52788 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
SMSP52788 ANO7L1-203ENST00000602586 1720 ntBASIC17.33■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms