Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.01■□□□□ 0.79
TNFSF9P41273 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF9P41273 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.01■□□□□ 0.79
TNFSF9P41273 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF9P41273 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
TNFSF9P41273 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20■□□□□ 0.79
TNFSF9P41273 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFSF9P41273 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFSF9P41273 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF9P41273 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF9P41273 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
TNFSF9P41273 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20■□□□□ 0.79
TNFSF9P41273 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20■□□□□ 0.79
TNFSF9P41273 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF9P41273 FXN-203ENST00000396366 922 ntTSL 2 BASIC20■□□□□ 0.79
TNFSF9P41273 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20■□□□□ 0.79
TNFSF9P41273 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF9P41273 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20■□□□□ 0.79
TNFSF9P41273 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20■□□□□ 0.79
TNFSF9P41273 AL136038.3-201ENST00000561909 1096 ntBASIC20■□□□□ 0.79
TNFSF9P41273 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFSF9P41273 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFSF9P41273 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF9P41273 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TNFSF9P41273 WIZP1-201ENST00000531444 2299 ntBASIC20■□□□□ 0.79
TNFSF9P41273 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFSF9P41273 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20■□□□□ 0.79
TNFSF9P41273 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF9P41273 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF9P41273 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.99■□□□□ 0.79
TNFSF9P41273 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF9P41273 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF9P41273 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF9P41273 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF9P41273 MIR149-201ENST00000384879 89 ntBASIC19.99■□□□□ 0.79
TNFSF9P41273 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC19.99■□□□□ 0.79
TNFSF9P41273 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.99■□□□□ 0.79
TNFSF9P41273 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF9P41273 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.99■□□□□ 0.79
TNFSF9P41273 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.99■□□□□ 0.79
TNFSF9P41273 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.99■□□□□ 0.79
TNFSF9P41273 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF9P41273 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.99■□□□□ 0.79
TNFSF9P41273 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.99■□□□□ 0.79
TNFSF9P41273 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.99■□□□□ 0.79
TNFSF9P41273 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF9P41273 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF9P41273 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TNFSF9P41273 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.99■□□□□ 0.79
TNFSF9P41273 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TNFSF9P41273 AC009102.3-201ENST00000623118 1491 ntBASIC19.99■□□□□ 0.79
TNFSF9P41273 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.98■□□□□ 0.79
TNFSF9P41273 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF9P41273 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TNFSF9P41273 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF9P41273 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC19.98■□□□□ 0.79
TNFSF9P41273 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.98■□□□□ 0.79
TNFSF9P41273 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF9P41273 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
TNFSF9P41273 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.98■□□□□ 0.79
TNFSF9P41273 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFSF9P41273 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFSF9P41273 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF9P41273 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF9P41273 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF9P41273 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF9P41273 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
TNFSF9P41273 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFSF9P41273 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF9P41273 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF9P41273 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF9P41273 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF9P41273 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.98■□□□□ 0.79
TNFSF9P41273 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
TNFSF9P41273 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
TNFSF9P41273 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
TNFSF9P41273 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.97■□□□□ 0.79
TNFSF9P41273 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF9P41273 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.97■□□□□ 0.79
TNFSF9P41273 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF9P41273 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF9P41273 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
TNFSF9P41273 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF9P41273 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF9P41273 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF9P41273 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.97■□□□□ 0.79
TNFSF9P41273 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF9P41273 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
TNFSF9P41273 AC116407.4-201ENST00000623319 1061 ntBASIC19.97■□□□□ 0.79
TNFSF9P41273 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
TNFSF9P41273 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
TNFSF9P41273 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.97■□□□□ 0.79
TNFSF9P41273 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.97■□□□□ 0.79
TNFSF9P41273 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF9P41273 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC19.97■□□□□ 0.79
TNFSF9P41273 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF9P41273 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.97■□□□□ 0.79
TNFSF9P41273 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
TNFSF9P41273 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.96■□□□□ 0.79
TNFSF9P41273 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms