Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.18■□□□□ 0.82
HOXC8P31273 MYLKP1-201ENST00000509077 1580 ntBASIC20.18■□□□□ 0.82
HOXC8P31273 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC8P31273 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC8P31273 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC8P31273 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
HOXC8P31273 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC20.18■□□□□ 0.82
HOXC8P31273 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC8P31273 MINOS1P3-201ENST00000457048 203 ntBASIC20.18■□□□□ 0.82
HOXC8P31273 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.18■□□□□ 0.82
HOXC8P31273 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC8P31273 AC005336.2-201ENST00000593183 939 ntBASIC20.18■□□□□ 0.82
HOXC8P31273 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC8P31273 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC20.18■□□□□ 0.82
HOXC8P31273 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.18■□□□□ 0.82
HOXC8P31273 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
HOXC8P31273 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HOXC8P31273 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC20.18■□□□□ 0.82
HOXC8P31273 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.18■□□□□ 0.82
HOXC8P31273 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC8P31273 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC8P31273 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC8P31273 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.17■□□□□ 0.82
HOXC8P31273 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC8P31273 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.17■□□□□ 0.82
HOXC8P31273 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC8P31273 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC8P31273 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC8P31273 AL022342.1-201ENST00000400363 863 ntBASIC20.17■□□□□ 0.82
HOXC8P31273 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC8P31273 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.17■□□□□ 0.82
HOXC8P31273 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.17■□□□□ 0.82
HOXC8P31273 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.17■□□□□ 0.82
HOXC8P31273 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC8P31273 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
HOXC8P31273 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
HOXC8P31273 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC20.17■□□□□ 0.82
HOXC8P31273 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
HOXC8P31273 AC112777.1-201ENST00000540175 1423 ntBASIC20.17■□□□□ 0.82
HOXC8P31273 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
HOXC8P31273 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.17■□□□□ 0.82
HOXC8P31273 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
HOXC8P31273 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HOXC8P31273 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC8P31273 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC8P31273 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
HOXC8P31273 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC8P31273 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.16■□□□□ 0.82
HOXC8P31273 AC068472.1-201ENST00000474589 881 ntBASIC20.16■□□□□ 0.82
HOXC8P31273 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC8P31273 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HOXC8P31273 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.16■□□□□ 0.82
HOXC8P31273 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.16■□□□□ 0.82
HOXC8P31273 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HOXC8P31273 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.16■□□□□ 0.82
HOXC8P31273 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
HOXC8P31273 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC20.16■□□□□ 0.82
HOXC8P31273 MIR5100-201ENST00000579544 119 ntBASIC20.16■□□□□ 0.82
HOXC8P31273 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.16■□□□□ 0.82
HOXC8P31273 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC8P31273 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC8P31273 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.16■□□□□ 0.82
HOXC8P31273 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
HOXC8P31273 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC8P31273 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC8P31273 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
HOXC8P31273 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
HOXC8P31273 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC20.16■□□□□ 0.82
HOXC8P31273 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
HOXC8P31273 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC8P31273 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC8P31273 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.15■□□□□ 0.82
HOXC8P31273 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.15■□□□□ 0.82
HOXC8P31273 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
HOXC8P31273 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.15■□□□□ 0.82
HOXC8P31273 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.15■□□□□ 0.82
HOXC8P31273 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
HOXC8P31273 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC8P31273 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC20.15■□□□□ 0.82
HOXC8P31273 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC8P31273 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.15■□□□□ 0.82
HOXC8P31273 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC8P31273 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
HOXC8P31273 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC8P31273 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC8P31273 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.15■□□□□ 0.82
HOXC8P31273 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
HOXC8P31273 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.14■□□□□ 0.81
HOXC8P31273 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HOXC8P31273 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC8P31273 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC20.14■□□□□ 0.81
HOXC8P31273 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
HOXC8P31273 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC8P31273 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC8P31273 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC8P31273 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
HOXC8P31273 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC20.14■□□□□ 0.81
HOXC8P31273 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC20.14■□□□□ 0.81
HOXC8P31273 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.14■□□□□ 0.81
HOXC8P31273 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms