Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.98■□□□□ 0.31
SHC1P29353 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.98■□□□□ 0.31
SHC1P29353 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.98■□□□□ 0.31
SHC1P29353 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SHC1P29353 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.97■□□□□ 0.31
SHC1P29353 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.97■□□□□ 0.31
SHC1P29353 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 AL512353.2-201ENST00000448759 1962 ntBASIC16.97■□□□□ 0.31
SHC1P29353 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SHC1P29353 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.97■□□□□ 0.31
SHC1P29353 TSPY17P-201ENST00000450329 467 ntBASIC16.97■□□□□ 0.31
SHC1P29353 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SHC1P29353 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
SHC1P29353 AC090340.1-201ENST00000620778 4980 ntBASIC16.97■□□□□ 0.31
SHC1P29353 NOC2LP1-202ENST00000452600 2235 ntBASIC16.97■□□□□ 0.31
SHC1P29353 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SHC1P29353 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC1P29353 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.96■□□□□ 0.31
SHC1P29353 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC1P29353 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC1P29353 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SHC1P29353 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC1P29353 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC1P29353 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.96■□□□□ 0.31
SHC1P29353 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC16.96■□□□□ 0.31
SHC1P29353 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC1P29353 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.96■□□□□ 0.31
SHC1P29353 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.96■□□□□ 0.31
SHC1P29353 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHC1P29353 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC1P29353 AL023284.2-201ENST00000405850 579 ntBASIC16.96■□□□□ 0.31
SHC1P29353 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.96■□□□□ 0.31
SHC1P29353 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.96■□□□□ 0.31
SHC1P29353 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC1P29353 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.96■□□□□ 0.31
SHC1P29353 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC1P29353 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.96■□□□□ 0.31
SHC1P29353 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SHC1P29353 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHC1P29353 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.96■□□□□ 0.31
SHC1P29353 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SHC1P29353 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SHC1P29353 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SHC1P29353 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.96■□□□□ 0.31
SHC1P29353 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
SHC1P29353 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
SHC1P29353 RCC2P3-201ENST00000418112 1537 ntBASIC16.96■□□□□ 0.3
SHC1P29353 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
SHC1P29353 KRT18P22-201ENST00000402024 1347 ntBASIC16.96■□□□□ 0.3
SHC1P29353 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SHC1P29353 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.95■□□□□ 0.3
SHC1P29353 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHC1P29353 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
SHC1P29353 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHC1P29353 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.95■□□□□ 0.3
SHC1P29353 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.95■□□□□ 0.3
SHC1P29353 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.95■□□□□ 0.3
SHC1P29353 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHC1P29353 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHC1P29353 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.95■□□□□ 0.3
SHC1P29353 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHC1P29353 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.95■□□□□ 0.3
SHC1P29353 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHC1P29353 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.95■□□□□ 0.3
SHC1P29353 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
SHC1P29353 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC16.95■□□□□ 0.3
SHC1P29353 LINC01023-201ENST00000606054 436 ntBASIC16.95■□□□□ 0.3
SHC1P29353 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHC1P29353 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
SHC1P29353 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.95■□□□□ 0.3
SHC1P29353 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.95■□□□□ 0.3
SHC1P29353 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHC1P29353 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHC1P29353 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.95■□□□□ 0.3
SHC1P29353 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SHC1P29353 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
SHC1P29353 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SHC1P29353 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.94■□□□□ 0.3
SHC1P29353 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms