Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC20.83■□□□□ 0.93
CTGFP29279 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.83■□□□□ 0.93
CTGFP29279 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.83■□□□□ 0.93
CTGFP29279 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.83■□□□□ 0.93
CTGFP29279 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
CTGFP29279 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CTGFP29279 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.92
CTGFP29279 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTGFP29279 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.92
CTGFP29279 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.83■□□□□ 0.92
CTGFP29279 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.83■□□□□ 0.92
CTGFP29279 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTGFP29279 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTGFP29279 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTGFP29279 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTGFP29279 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
CTGFP29279 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTGFP29279 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTGFP29279 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTGFP29279 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.82■□□□□ 0.92
CTGFP29279 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.82■□□□□ 0.92
CTGFP29279 OR7E14P-202ENST00000530490 1290 ntBASIC20.82■□□□□ 0.92
CTGFP29279 AC011467.2-201ENST00000598425 242 ntBASIC20.82■□□□□ 0.92
CTGFP29279 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CTGFP29279 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.82■□□□□ 0.92
CTGFP29279 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.82■□□□□ 0.92
CTGFP29279 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC20.82■□□□□ 0.92
CTGFP29279 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC20.82■□□□□ 0.92
CTGFP29279 AC125437.2-201ENST00000625180 2167 ntBASIC20.82■□□□□ 0.92
CTGFP29279 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CTGFP29279 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTGFP29279 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTGFP29279 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.81■□□□□ 0.92
CTGFP29279 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC20.81■□□□□ 0.92
CTGFP29279 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTGFP29279 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTGFP29279 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTGFP29279 PMP22-202ENST00000395936 816 ntTSL 3 BASIC20.81■□□□□ 0.92
CTGFP29279 ABCD1P5-201ENST00000445663 754 ntBASIC20.81■□□□□ 0.92
CTGFP29279 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC20.81■□□□□ 0.92
CTGFP29279 AC113404.2-201ENST00000507884 177 ntBASIC20.81■□□□□ 0.92
CTGFP29279 AC009533.2-201ENST00000543664 586 ntBASIC20.81■□□□□ 0.92
CTGFP29279 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.81■□□□□ 0.92
CTGFP29279 AC040169.1-201ENST00000565382 521 ntBASIC20.81■□□□□ 0.92
CTGFP29279 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTGFP29279 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTGFP29279 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.81■□□□□ 0.92
CTGFP29279 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTGFP29279 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTGFP29279 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTGFP29279 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTGFP29279 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CTGFP29279 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTGFP29279 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CTGFP29279 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTGFP29279 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTGFP29279 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTGFP29279 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CTGFP29279 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
CTGFP29279 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.8■□□□□ 0.92
CTGFP29279 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTGFP29279 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.8■□□□□ 0.92
CTGFP29279 FP475955.4-201ENST00000623131 1990 ntBASIC20.8■□□□□ 0.92
CTGFP29279 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC20.8■□□□□ 0.92
CTGFP29279 DNAJB3-202ENST00000449667 1266 ntBASIC20.8■□□□□ 0.92
CTGFP29279 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
CTGFP29279 UNC93B6-202ENST00000528242 690 ntBASIC20.8■□□□□ 0.92
CTGFP29279 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC20.8■□□□□ 0.92
CTGFP29279 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC20.8■□□□□ 0.92
CTGFP29279 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC20.8■□□□□ 0.92
CTGFP29279 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC20.8■□□□□ 0.92
CTGFP29279 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTGFP29279 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTGFP29279 AP002414.3-201ENST00000589352 1468 ntBASIC20.8■□□□□ 0.92
CTGFP29279 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTGFP29279 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.8■□□□□ 0.92
CTGFP29279 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.8■□□□□ 0.92
CTGFP29279 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTGFP29279 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
CTGFP29279 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CTGFP29279 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTGFP29279 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.79■□□□□ 0.92
CTGFP29279 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CTGFP29279 MTMR9LP-203ENST00000426597 1545 ntBASIC20.79■□□□□ 0.92
CTGFP29279 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTGFP29279 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.79■□□□□ 0.92
CTGFP29279 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTGFP29279 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.79■□□□□ 0.92
CTGFP29279 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTGFP29279 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTGFP29279 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CTGFP29279 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTGFP29279 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CTGFP29279 RAB17-203ENST00000409576 466 ntTSL 3 BASIC20.79■□□□□ 0.92
CTGFP29279 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC20.79■□□□□ 0.92
CTGFP29279 AC007967.2-201ENST00000432613 625 ntBASIC20.79■□□□□ 0.92
CTGFP29279 MIR3687-2-201ENST00000577708 61 ntBASIC20.79■□□□□ 0.92
CTGFP29279 MIR3687-1-201ENST00000614492 61 ntBASIC20.79■□□□□ 0.92
CTGFP29279 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CTGFP29279 AC008735.5-201ENST00000623544 497 ntBASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms