Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.69■□□□□ 0.58
XPAP23025 AC006333.2-201ENST00000607957 2099 ntBASIC18.69■□□□□ 0.58
XPAP23025 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
XPAP23025 HOXB1-202ENST00000577092 1414 ntBASIC18.69■□□□□ 0.58
XPAP23025 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 Z98044.1-201ENST00000632503 1764 ntBASIC18.69■□□□□ 0.58
XPAP23025 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
XPAP23025 AL671277.2-201ENST00000458060 996 ntBASIC18.69■□□□□ 0.58
XPAP23025 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.69■□□□□ 0.58
XPAP23025 TPM1-226ENST00000560959 925 ntTSL 2 BASIC18.69■□□□□ 0.58
XPAP23025 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
XPAP23025 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
XPAP23025 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 AL357033.4-201ENST00000617703 1807 ntBASIC18.69■□□□□ 0.58
XPAP23025 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.69■□□□□ 0.58
XPAP23025 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
XPAP23025 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
XPAP23025 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.68■□□□□ 0.58
XPAP23025 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
XPAP23025 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XPAP23025 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
XPAP23025 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.68■□□□□ 0.58
XPAP23025 AC112907.2-201ENST00000448639 330 ntBASIC18.68■□□□□ 0.58
XPAP23025 RASA4DP-201ENST00000460726 1199 ntBASIC18.68■□□□□ 0.58
XPAP23025 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.68■□□□□ 0.58
XPAP23025 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
XPAP23025 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.68■□□□□ 0.58
XPAP23025 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.68■□□□□ 0.58
XPAP23025 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XPAP23025 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
XPAP23025 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.68■□□□□ 0.58
XPAP23025 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.68■□□□□ 0.58
XPAP23025 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.68■□□□□ 0.58
XPAP23025 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC18.68■□□□□ 0.58
XPAP23025 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
XPAP23025 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
XPAP23025 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XPAP23025 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.67■□□□□ 0.58
XPAP23025 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
XPAP23025 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
XPAP23025 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
XPAP23025 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
XPAP23025 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XPAP23025 KRT18P38-201ENST00000449496 1282 ntBASIC18.67■□□□□ 0.58
XPAP23025 SEC1P-202ENST00000473944 940 ntBASIC18.67■□□□□ 0.58
XPAP23025 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
XPAP23025 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XPAP23025 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
XPAP23025 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XPAP23025 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
XPAP23025 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.67■□□□□ 0.58
XPAP23025 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
XPAP23025 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
XPAP23025 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
XPAP23025 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XPAP23025 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
XPAP23025 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
XPAP23025 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XPAP23025 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.66■□□□□ 0.58
XPAP23025 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.66■□□□□ 0.58
XPAP23025 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
XPAP23025 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
XPAP23025 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.66■□□□□ 0.58
XPAP23025 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XPAP23025 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XPAP23025 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XPAP23025 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
XPAP23025 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
XPAP23025 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.66■□□□□ 0.58
XPAP23025 SPDYE15P-201ENST00000424157 909 ntBASIC18.66■□□□□ 0.58
XPAP23025 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.66■□□□□ 0.58
XPAP23025 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.66■□□□□ 0.58
XPAP23025 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
XPAP23025 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.66■□□□□ 0.58
XPAP23025 AC104390.1-201ENST00000555663 520 ntBASIC18.66■□□□□ 0.58
XPAP23025 AC009065.1-201ENST00000564055 1225 ntBASIC18.66■□□□□ 0.58
XPAP23025 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
XPAP23025 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
XPAP23025 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.66■□□□□ 0.58
XPAP23025 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.66■□□□□ 0.58
XPAP23025 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
XPAP23025 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XPAP23025 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.66■□□□□ 0.58
XPAP23025 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
XPAP23025 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
XPAP23025 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
XPAP23025 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
XPAP23025 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
XPAP23025 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
XPAP23025 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms