Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
RAB4AP20338 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 PCDHA1-201ENST00000378133 2726 ntBASIC14.2□□□□□ -0.14
RAB4AP20338 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
RAB4AP20338 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 AC008764.6-201ENST00000595909 2069 ntBASIC14.19□□□□□ -0.14
RAB4AP20338 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB4AP20338 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
RAB4AP20338 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB4AP20338 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.19□□□□□ -0.14
RAB4AP20338 VMO1-204ENST00000441199 741 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB4AP20338 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB4AP20338 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB4AP20338 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 AC141586.3-201ENST00000562166 1838 ntBASIC14.19□□□□□ -0.14
RAB4AP20338 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.19□□□□□ -0.14
RAB4AP20338 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.19□□□□□ -0.14
RAB4AP20338 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RAB4AP20338 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
RAB4AP20338 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
RAB4AP20338 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB4AP20338 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB4AP20338 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RAB4AP20338 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB4AP20338 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RAB4AP20338 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
RAB4AP20338 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RAB4AP20338 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
RAB4AP20338 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB4AP20338 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB4AP20338 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC14.18□□□□□ -0.14
RAB4AP20338 SLC7A5P1-201ENST00000568957 537 ntBASIC14.18□□□□□ -0.14
RAB4AP20338 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB4AP20338 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
RAB4AP20338 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC14.18□□□□□ -0.14
RAB4AP20338 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
RAB4AP20338 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.18□□□□□ -0.14
RAB4AP20338 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
RAB4AP20338 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
RAB4AP20338 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB4AP20338 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC14.18□□□□□ -0.14
RAB4AP20338 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
RAB4AP20338 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAB4AP20338 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
RAB4AP20338 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.17□□□□□ -0.14
RAB4AP20338 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
RAB4AP20338 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
RAB4AP20338 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB4AP20338 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
RAB4AP20338 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB4AP20338 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
RAB4AP20338 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC14.17□□□□□ -0.14
RAB4AP20338 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
RAB4AP20338 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
RAB4AP20338 EDA-201ENST00000338901 1233 ntBASIC14.17□□□□□ -0.14
RAB4AP20338 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms