Protein–RNA interactions for Protein: P12955

PEPD, Xaa-Pro dipeptidase, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEPDP12955 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PEPDP12955 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PEPDP12955 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PEPDP12955 AC083906.6-201ENST00000641366 219 ntBASIC17.15■□□□□ 0.34
PEPDP12955 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PEPDP12955 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PEPDP12955 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PEPDP12955 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PEPDP12955 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PEPDP12955 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PEPDP12955 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
PEPDP12955 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PEPDP12955 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PEPDP12955 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.15■□□□□ 0.34
PEPDP12955 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PEPDP12955 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PEPDP12955 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PEPDP12955 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
PEPDP12955 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.14■□□□□ 0.34
PEPDP12955 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PEPDP12955 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
PEPDP12955 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PEPDP12955 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PEPDP12955 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.14■□□□□ 0.33
PEPDP12955 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PEPDP12955 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.14■□□□□ 0.33
PEPDP12955 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PEPDP12955 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PEPDP12955 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PEPDP12955 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.14■□□□□ 0.33
PEPDP12955 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
PEPDP12955 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.14■□□□□ 0.33
PEPDP12955 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.14■□□□□ 0.33
PEPDP12955 AC010653.2-201ENST00000623505 997 ntBASIC17.14■□□□□ 0.33
PEPDP12955 AC135050.7-201ENST00000624508 2218 ntBASIC17.14■□□□□ 0.33
PEPDP12955 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PEPDP12955 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PEPDP12955 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PEPDP12955 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PEPDP12955 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PEPDP12955 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PEPDP12955 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PEPDP12955 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PEPDP12955 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PEPDP12955 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PEPDP12955 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.13■□□□□ 0.33
PEPDP12955 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.13■□□□□ 0.33
PEPDP12955 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.13■□□□□ 0.33
PEPDP12955 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PEPDP12955 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
PEPDP12955 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.13■□□□□ 0.33
PEPDP12955 SLC25A3P1-201ENST00000443844 931 ntBASIC17.13■□□□□ 0.33
PEPDP12955 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.13■□□□□ 0.33
PEPDP12955 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.13■□□□□ 0.33
PEPDP12955 AL353719.1-201ENST00000566847 864 ntBASIC17.13■□□□□ 0.33
PEPDP12955 AL023803.3-201ENST00000615559 522 ntBASIC17.13■□□□□ 0.33
PEPDP12955 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 AC005332.8-201ENST00000622750 2735 ntBASIC17.13■□□□□ 0.33
PEPDP12955 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.13■□□□□ 0.33
PEPDP12955 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.13■□□□□ 0.33
PEPDP12955 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.13■□□□□ 0.33
PEPDP12955 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PEPDP12955 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC17.13■□□□□ 0.33
PEPDP12955 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.13■□□□□ 0.33
PEPDP12955 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.13■□□□□ 0.33
PEPDP12955 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PEPDP12955 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEPDP12955 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PEPDP12955 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEPDP12955 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEPDP12955 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEPDP12955 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PEPDP12955 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
PEPDP12955 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEPDP12955 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEPDP12955 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PEPDP12955 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEPDP12955 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEPDP12955 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEPDP12955 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEPDP12955 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
PEPDP12955 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.12■□□□□ 0.33
PEPDP12955 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
PEPDP12955 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEPDP12955 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PEPDP12955 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms