Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
THBS1P07996 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.05■□□□□ 0.32
THBS1P07996 AL353719.1-201ENST00000566847 864 ntBASIC17.05■□□□□ 0.32
THBS1P07996 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 AC097493.4-201ENST00000641197 219 ntBASIC17.05■□□□□ 0.32
THBS1P07996 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 AC093677.2-201ENST00000600169 1863 ntBASIC17.05■□□□□ 0.32
THBS1P07996 AC135776.1-201ENST00000319817 2481 ntBASIC17.05■□□□□ 0.32
THBS1P07996 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
THBS1P07996 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
THBS1P07996 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.05■□□□□ 0.32
THBS1P07996 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
THBS1P07996 KRT8P7-201ENST00000533003 1432 ntBASIC17.04■□□□□ 0.32
THBS1P07996 HOXB1-202ENST00000577092 1414 ntBASIC17.04■□□□□ 0.32
THBS1P07996 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
THBS1P07996 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THBS1P07996 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.04■□□□□ 0.32
THBS1P07996 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.04■□□□□ 0.32
THBS1P07996 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THBS1P07996 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
THBS1P07996 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
THBS1P07996 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
THBS1P07996 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THBS1P07996 CCR12P-201ENST00000446203 998 ntBASIC17.04■□□□□ 0.32
THBS1P07996 TSPY15P-201ENST00000457163 923 ntBASIC17.04■□□□□ 0.32
THBS1P07996 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.04■□□□□ 0.32
THBS1P07996 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.04■□□□□ 0.32
THBS1P07996 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
THBS1P07996 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.04■□□□□ 0.32
THBS1P07996 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.04■□□□□ 0.32
THBS1P07996 FITM1-202ENST00000559294 800 ntBASIC17.04■□□□□ 0.32
THBS1P07996 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.04■□□□□ 0.32
THBS1P07996 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.04■□□□□ 0.32
THBS1P07996 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
THBS1P07996 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.04■□□□□ 0.32
THBS1P07996 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
THBS1P07996 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
THBS1P07996 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
THBS1P07996 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
THBS1P07996 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
THBS1P07996 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
THBS1P07996 AC036111.1-201ENST00000533973 1582 ntBASIC17.03■□□□□ 0.32
THBS1P07996 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
THBS1P07996 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
THBS1P07996 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
THBS1P07996 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
THBS1P07996 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
THBS1P07996 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
THBS1P07996 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.03■□□□□ 0.32
THBS1P07996 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.03■□□□□ 0.32
THBS1P07996 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
THBS1P07996 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.03■□□□□ 0.32
THBS1P07996 WWOX-216ENST00000569818 525 ntBASIC17.03■□□□□ 0.32
THBS1P07996 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.03■□□□□ 0.32
THBS1P07996 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
THBS1P07996 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
THBS1P07996 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
THBS1P07996 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.03■□□□□ 0.32
THBS1P07996 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.03■□□□□ 0.32
THBS1P07996 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
THBS1P07996 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
THBS1P07996 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
THBS1P07996 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
THBS1P07996 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
THBS1P07996 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
THBS1P07996 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
THBS1P07996 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
THBS1P07996 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.02■□□□□ 0.32
THBS1P07996 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.02■□□□□ 0.32
THBS1P07996 NOC2LP2-201ENST00000407594 1944 ntBASIC17.02■□□□□ 0.32
THBS1P07996 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
THBS1P07996 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
THBS1P07996 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.02■□□□□ 0.32
THBS1P07996 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
THBS1P07996 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
THBS1P07996 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
THBS1P07996 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
THBS1P07996 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
THBS1P07996 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.02■□□□□ 0.32
THBS1P07996 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
THBS1P07996 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.02■□□□□ 0.32
THBS1P07996 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.02■□□□□ 0.32
THBS1P07996 AP003041.3-201ENST00000527151 707 ntBASIC17.02■□□□□ 0.32
THBS1P07996 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.02■□□□□ 0.32
THBS1P07996 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
THBS1P07996 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.02■□□□□ 0.32
THBS1P07996 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.02■□□□□ 0.32
THBS1P07996 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.02■□□□□ 0.32
THBS1P07996 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
THBS1P07996 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
THBS1P07996 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
THBS1P07996 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
THBS1P07996 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.02■□□□□ 0.31
THBS1P07996 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
THBS1P07996 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
THBS1P07996 AC092338.2-201ENST00000568827 1415 ntBASIC17.02■□□□□ 0.31
THBS1P07996 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.02■□□□□ 0.31
THBS1P07996 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms