Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC092865.5-201ENST00000545435 363 ntBASIC18.65■□□□□ 0.58
RETP07949 MIR3917-201ENST00000580971 93 ntBASIC18.65■□□□□ 0.58
RETP07949 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RETP07949 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
RETP07949 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.65■□□□□ 0.58
RETP07949 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
RETP07949 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
RETP07949 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.65■□□□□ 0.58
RETP07949 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.65■□□□□ 0.58
RETP07949 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.65■□□□□ 0.58
RETP07949 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
RETP07949 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
RETP07949 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RETP07949 AC036111.1-201ENST00000533973 1582 ntBASIC18.64■□□□□ 0.58
RETP07949 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
RETP07949 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RETP07949 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.64■□□□□ 0.57
RETP07949 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RETP07949 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RETP07949 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RETP07949 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.64■□□□□ 0.57
RETP07949 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RETP07949 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
RETP07949 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.64■□□□□ 0.57
RETP07949 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.64■□□□□ 0.57
RETP07949 SAPCD2P3-201ENST00000455031 850 ntBASIC18.64■□□□□ 0.57
RETP07949 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC18.64■□□□□ 0.57
RETP07949 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RETP07949 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.64■□□□□ 0.57
RETP07949 AC099336.1-202ENST00000602961 463 ntBASIC18.64■□□□□ 0.57
RETP07949 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RETP07949 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RETP07949 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RETP07949 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
RETP07949 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
RETP07949 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RETP07949 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RETP07949 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RETP07949 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
RETP07949 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
RETP07949 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RETP07949 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RETP07949 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.63■□□□□ 0.57
RETP07949 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.63■□□□□ 0.57
RETP07949 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.63■□□□□ 0.57
RETP07949 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.63■□□□□ 0.57
RETP07949 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
RETP07949 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RETP07949 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RETP07949 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RETP07949 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
RETP07949 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RETP07949 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.63■□□□□ 0.57
RETP07949 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.63■□□□□ 0.57
RETP07949 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.63■□□□□ 0.57
RETP07949 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RETP07949 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC18.63■□□□□ 0.57
RETP07949 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RETP07949 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
RETP07949 Z69720.1-201ENST00000601483 472 ntBASIC18.63■□□□□ 0.57
RETP07949 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.63■□□□□ 0.57
RETP07949 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RETP07949 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.63■□□□□ 0.57
RETP07949 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.63■□□□□ 0.57
RETP07949 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RETP07949 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RETP07949 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RETP07949 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RETP07949 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.63■□□□□ 0.57
RETP07949 Z83836.1-201ENST00000624605 1642 ntBASIC18.63■□□□□ 0.57
RETP07949 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.63■□□□□ 0.57
RETP07949 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RETP07949 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RETP07949 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RETP07949 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RETP07949 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
RETP07949 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RETP07949 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RETP07949 AKR1C7P-201ENST00000305623 895 ntBASIC18.62■□□□□ 0.57
RETP07949 AL023284.2-201ENST00000405850 579 ntBASIC18.62■□□□□ 0.57
RETP07949 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.62■□□□□ 0.57
RETP07949 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
RETP07949 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC18.62■□□□□ 0.57
RETP07949 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
RETP07949 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.62■□□□□ 0.57
RETP07949 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC18.62■□□□□ 0.57
RETP07949 MIR3180-5-201ENST00000583743 153 ntBASIC18.62■□□□□ 0.57
RETP07949 IGHV3-41-201ENST00000613121 348 ntBASIC18.62■□□□□ 0.57
RETP07949 AC112497.1-201ENST00000624824 639 ntBASIC18.62■□□□□ 0.57
RETP07949 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.62■□□□□ 0.57
RETP07949 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
RETP07949 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
RETP07949 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms