Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC24.32■■□□□ 1.48
COL5A2P05997 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC24.32■■□□□ 1.48
COL5A2P05997 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC24.32■■□□□ 1.48
COL5A2P05997 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
COL5A2P05997 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC24.32■■□□□ 1.48
COL5A2P05997 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC24.32■■□□□ 1.48
COL5A2P05997 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC24.32■■□□□ 1.48
COL5A2P05997 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL5A2P05997 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC24.31■■□□□ 1.48
COL5A2P05997 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC24.31■■□□□ 1.48
COL5A2P05997 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC24.31■■□□□ 1.48
COL5A2P05997 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.31■■□□□ 1.48
COL5A2P05997 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC24.31■■□□□ 1.48
COL5A2P05997 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC24.31■■□□□ 1.48
COL5A2P05997 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL5A2P05997 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC24.31■■□□□ 1.48
COL5A2P05997 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
COL5A2P05997 RPS2P28-201ENST00000314255 741 ntBASIC24.31■■□□□ 1.48
COL5A2P05997 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC24.31■■□□□ 1.48
COL5A2P05997 AP001160.2-201ENST00000596071 487 ntBASIC24.31■■□□□ 1.48
COL5A2P05997 AL355385.1-201ENST00000606123 409 ntBASIC24.31■■□□□ 1.48
COL5A2P05997 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
COL5A2P05997 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
COL5A2P05997 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC24.3■■□□□ 1.48
COL5A2P05997 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
COL5A2P05997 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL5A2P05997 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
COL5A2P05997 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC24.3■■□□□ 1.48
COL5A2P05997 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL5A2P05997 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC24.3■■□□□ 1.48
COL5A2P05997 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC24.3■■□□□ 1.48
COL5A2P05997 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
COL5A2P05997 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL5A2P05997 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
COL5A2P05997 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC24.3■■□□□ 1.48
COL5A2P05997 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL5A2P05997 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
COL5A2P05997 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
COL5A2P05997 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
COL5A2P05997 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
COL5A2P05997 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC24.29■■□□□ 1.48
COL5A2P05997 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC24.29■■□□□ 1.48
COL5A2P05997 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL5A2P05997 YBX2P1-201ENST00000394192 760 ntBASIC24.29■■□□□ 1.48
COL5A2P05997 URGCP-206ENST00000446958 365 ntTSL 2 BASIC24.29■■□□□ 1.48
COL5A2P05997 AC092910.1-201ENST00000482027 1129 ntBASIC24.29■■□□□ 1.48
COL5A2P05997 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC24.29■■□□□ 1.48
COL5A2P05997 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC24.29■■□□□ 1.48
COL5A2P05997 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC24.29■■□□□ 1.48
COL5A2P05997 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.29■■□□□ 1.48
COL5A2P05997 AL024508.2-201ENST00000607749 1894 ntBASIC24.29■■□□□ 1.48
COL5A2P05997 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC24.29■■□□□ 1.48
COL5A2P05997 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL5A2P05997 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC24.29■■□□□ 1.48
COL5A2P05997 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL5A2P05997 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL5A2P05997 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
COL5A2P05997 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
COL5A2P05997 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
COL5A2P05997 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL5A2P05997 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL5A2P05997 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC24.28■■□□□ 1.48
COL5A2P05997 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL5A2P05997 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL5A2P05997 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC24.28■■□□□ 1.48
COL5A2P05997 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC24.28■■□□□ 1.48
COL5A2P05997 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
COL5A2P05997 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
COL5A2P05997 IMP4-203ENST00000409935 958 ntTSL 5 BASIC24.28■■□□□ 1.48
COL5A2P05997 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC24.28■■□□□ 1.48
COL5A2P05997 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
COL5A2P05997 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC24.28■■□□□ 1.48
COL5A2P05997 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC24.28■■□□□ 1.48
COL5A2P05997 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC24.28■■□□□ 1.48
COL5A2P05997 AL139424.1-201ENST00000607572 797 ntBASIC24.28■■□□□ 1.48
COL5A2P05997 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL5A2P05997 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL5A2P05997 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
COL5A2P05997 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL5A2P05997 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
COL5A2P05997 AC125634.1-201ENST00000438758 1403 ntBASIC24.28■■□□□ 1.48
COL5A2P05997 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
COL5A2P05997 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
COL5A2P05997 HLA-J-201ENST00000462773 1622 ntBASIC24.27■■□□□ 1.48
COL5A2P05997 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL5A2P05997 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC24.27■■□□□ 1.48
COL5A2P05997 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL5A2P05997 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL5A2P05997 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC24.27■■□□□ 1.48
COL5A2P05997 FIS1-203ENST00000442303 631 ntTSL 3 BASIC24.27■■□□□ 1.48
COL5A2P05997 ABCD1P5-201ENST00000445663 754 ntBASIC24.27■■□□□ 1.48
COL5A2P05997 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC24.27■■□□□ 1.48
COL5A2P05997 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC24.27■■□□□ 1.48
COL5A2P05997 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC24.27■■□□□ 1.48
COL5A2P05997 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
COL5A2P05997 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL5A2P05997 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
COL5A2P05997 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC24.27■■□□□ 1.48
COL5A2P05997 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
COL5A2P05997 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms