Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 AL163051.1-201ENST00000569214 1512 ntBASIC18.78■□□□□ 0.6
HLA-DQB2P05538 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.78■□□□□ 0.6
HLA-DQB2P05538 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HLA-DQB2P05538 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 GRAMD4P1-201ENST00000435181 1110 ntBASIC18.77■□□□□ 0.6
HLA-DQB2P05538 ATP5G1P1-201ENST00000448724 379 ntBASIC18.77■□□□□ 0.6
HLA-DQB2P05538 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 AL023973.1-201ENST00000624619 620 ntBASIC18.77■□□□□ 0.6
HLA-DQB2P05538 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.77■□□□□ 0.6
HLA-DQB2P05538 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
HLA-DQB2P05538 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.77■□□□□ 0.59
HLA-DQB2P05538 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.77■□□□□ 0.59
HLA-DQB2P05538 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
HLA-DQB2P05538 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
HLA-DQB2P05538 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HLA-DQB2P05538 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
HLA-DQB2P05538 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
HLA-DQB2P05538 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.77■□□□□ 0.59
HLA-DQB2P05538 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 KRT18P57-201ENST00000443599 1254 ntBASIC18.76■□□□□ 0.59
HLA-DQB2P05538 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 AC010240.3-201ENST00000607688 395 ntBASIC18.76■□□□□ 0.59
HLA-DQB2P05538 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.76■□□□□ 0.59
HLA-DQB2P05538 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HLA-DQB2P05538 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HLA-DQB2P05538 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms