Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A1P00352 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.07■□□□□ 0.96
ALDH1A1P00352 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC21.07■□□□□ 0.96
ALDH1A1P00352 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.07■□□□□ 0.96
ALDH1A1P00352 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.07■□□□□ 0.96
ALDH1A1P00352 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A1P00352 KIRREL3-AS3-201ENST00000404882 831 ntBASIC21.07■□□□□ 0.96
ALDH1A1P00352 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC21.07■□□□□ 0.96
ALDH1A1P00352 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC21.07■□□□□ 0.96
ALDH1A1P00352 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
ALDH1A1P00352 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A1P00352 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A1P00352 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A1P00352 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A1P00352 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ALDH1A1P00352 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC21.06■□□□□ 0.96
ALDH1A1P00352 KRT8P50-201ENST00000562022 1438 ntBASIC21.06■□□□□ 0.96
ALDH1A1P00352 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ALDH1A1P00352 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC21.06■□□□□ 0.96
ALDH1A1P00352 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ALDH1A1P00352 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC21.06■□□□□ 0.96
ALDH1A1P00352 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.06■□□□□ 0.96
ALDH1A1P00352 CRCP-205ENST00000431089 942 ntTSL 2 BASIC21.06■□□□□ 0.96
ALDH1A1P00352 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC21.06■□□□□ 0.96
ALDH1A1P00352 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC21.06■□□□□ 0.96
ALDH1A1P00352 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC21.06■□□□□ 0.96
ALDH1A1P00352 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ALDH1A1P00352 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ALDH1A1P00352 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ALDH1A1P00352 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
ALDH1A1P00352 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ALDH1A1P00352 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ALDH1A1P00352 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
ALDH1A1P00352 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.05■□□□□ 0.96
ALDH1A1P00352 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A1P00352 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A1P00352 Z98044.1-201ENST00000632503 1764 ntBASIC21.05■□□□□ 0.96
ALDH1A1P00352 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A1P00352 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A1P00352 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A1P00352 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A1P00352 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A1P00352 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.05■□□□□ 0.96
ALDH1A1P00352 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A1P00352 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC21.05■□□□□ 0.96
ALDH1A1P00352 METTL21AP1-201ENST00000438852 635 ntBASIC21.05■□□□□ 0.96
ALDH1A1P00352 CYMP-203ENST00000474680 1263 ntBASIC21.05■□□□□ 0.96
ALDH1A1P00352 CFL1-212ENST00000531413 636 ntTSL 3 BASIC21.05■□□□□ 0.96
ALDH1A1P00352 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.05■□□□□ 0.96
ALDH1A1P00352 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC21.05■□□□□ 0.96
ALDH1A1P00352 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC21.05■□□□□ 0.96
ALDH1A1P00352 AC107918.4-202ENST00000641623 219 ntBASIC21.05■□□□□ 0.96
ALDH1A1P00352 AC068587.9-201ENST00000641814 219 ntBASIC21.05■□□□□ 0.96
ALDH1A1P00352 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A1P00352 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21.05■□□□□ 0.96
ALDH1A1P00352 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A1P00352 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.05■□□□□ 0.96
ALDH1A1P00352 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A1P00352 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ALDH1A1P00352 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A1P00352 AL163051.1-201ENST00000569214 1512 ntBASIC21.04■□□□□ 0.96
ALDH1A1P00352 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A1P00352 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ALDH1A1P00352 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
ALDH1A1P00352 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A1P00352 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A1P00352 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A1P00352 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A1P00352 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.04■□□□□ 0.96
ALDH1A1P00352 RFPL4AP1-201ENST00000530883 850 ntBASIC21.04■□□□□ 0.96
ALDH1A1P00352 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC21.04■□□□□ 0.96
ALDH1A1P00352 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.04■□□□□ 0.96
ALDH1A1P00352 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.04■□□□□ 0.96
ALDH1A1P00352 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC21.04■□□□□ 0.96
ALDH1A1P00352 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.04■□□□□ 0.96
ALDH1A1P00352 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A1P00352 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A1P00352 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A1P00352 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.04■□□□□ 0.96
ALDH1A1P00352 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A1P00352 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A1P00352 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A1P00352 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A1P00352 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.04■□□□□ 0.96
ALDH1A1P00352 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A1P00352 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
ALDH1A1P00352 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.04■□□□□ 0.96
ALDH1A1P00352 AL357033.4-201ENST00000617703 1807 ntBASIC21.04■□□□□ 0.96
ALDH1A1P00352 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC21.04■□□□□ 0.96
ALDH1A1P00352 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALDH1A1P00352 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ALDH1A1P00352 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
ALDH1A1P00352 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
ALDH1A1P00352 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
ALDH1A1P00352 AC007967.2-201ENST00000432613 625 ntBASIC21.03■□□□□ 0.96
ALDH1A1P00352 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.03■□□□□ 0.96
ALDH1A1P00352 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC21.03■□□□□ 0.96
ALDH1A1P00352 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.03■□□□□ 0.96
ALDH1A1P00352 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC21.03■□□□□ 0.96
ALDH1A1P00352 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.03■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms