Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TOP3BO95985 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.97■□□□□ 0.63
TOP3BO95985 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC18.97■□□□□ 0.63
TOP3BO95985 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
TOP3BO95985 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.97■□□□□ 0.63
TOP3BO95985 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TOP3BO95985 TSPY21P-201ENST00000433481 731 ntBASIC18.97■□□□□ 0.63
TOP3BO95985 TSPY23P-201ENST00000440136 739 ntBASIC18.97■□□□□ 0.63
TOP3BO95985 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.97■□□□□ 0.63
TOP3BO95985 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.97■□□□□ 0.63
TOP3BO95985 GPALPP1-207ENST00000611650 899 ntBASIC18.97■□□□□ 0.63
TOP3BO95985 AL445675.2-201ENST00000620291 557 ntBASIC18.97■□□□□ 0.63
TOP3BO95985 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TOP3BO95985 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
TOP3BO95985 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
TOP3BO95985 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
TOP3BO95985 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.97■□□□□ 0.63
TOP3BO95985 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.97■□□□□ 0.63
TOP3BO95985 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.97■□□□□ 0.63
TOP3BO95985 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
TOP3BO95985 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TOP3BO95985 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.96■□□□□ 0.63
TOP3BO95985 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP3BO95985 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TOP3BO95985 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.96■□□□□ 0.63
TOP3BO95985 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP3BO95985 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP3BO95985 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
TOP3BO95985 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TOP3BO95985 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP3BO95985 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.96■□□□□ 0.63
TOP3BO95985 AC004980.1-204ENST00000429707 299 ntBASIC18.96■□□□□ 0.63
TOP3BO95985 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP3BO95985 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.96■□□□□ 0.63
TOP3BO95985 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TOP3BO95985 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP3BO95985 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.96■□□□□ 0.63
TOP3BO95985 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.96■□□□□ 0.63
TOP3BO95985 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.96■□□□□ 0.63
TOP3BO95985 AC130371.2-201ENST00000619443 611 ntBASIC18.96■□□□□ 0.63
TOP3BO95985 AC141257.4-201ENST00000634557 245 ntBASIC18.96■□□□□ 0.63
TOP3BO95985 AC136944.6-201ENST00000634818 245 ntBASIC18.96■□□□□ 0.63
TOP3BO95985 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TOP3BO95985 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TOP3BO95985 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
TOP3BO95985 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TOP3BO95985 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.96■□□□□ 0.63
TOP3BO95985 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP3BO95985 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
TOP3BO95985 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP3BO95985 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.96■□□□□ 0.63
TOP3BO95985 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
TOP3BO95985 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
TOP3BO95985 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
TOP3BO95985 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TOP3BO95985 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP3BO95985 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.95■□□□□ 0.62
TOP3BO95985 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP3BO95985 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.95■□□□□ 0.62
TOP3BO95985 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TOP3BO95985 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP3BO95985 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP3BO95985 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.95■□□□□ 0.62
TOP3BO95985 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.95■□□□□ 0.62
TOP3BO95985 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP3BO95985 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TOP3BO95985 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.95■□□□□ 0.62
TOP3BO95985 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.95■□□□□ 0.62
TOP3BO95985 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP3BO95985 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.95■□□□□ 0.62
TOP3BO95985 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TOP3BO95985 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.95■□□□□ 0.62
TOP3BO95985 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.95■□□□□ 0.62
TOP3BO95985 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.95■□□□□ 0.62
TOP3BO95985 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.95■□□□□ 0.62
TOP3BO95985 C1QL1P1-201ENST00000568105 661 ntBASIC18.95■□□□□ 0.62
TOP3BO95985 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.95■□□□□ 0.62
TOP3BO95985 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
TOP3BO95985 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
TOP3BO95985 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TOP3BO95985 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
TOP3BO95985 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.95■□□□□ 0.62
TOP3BO95985 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
TOP3BO95985 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.95■□□□□ 0.62
TOP3BO95985 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP3BO95985 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP3BO95985 BICD1-207ENST00000551848 1962 ntBASIC18.95■□□□□ 0.62
TOP3BO95985 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
TOP3BO95985 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.95■□□□□ 0.62
TOP3BO95985 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TOP3BO95985 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TOP3BO95985 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TOP3BO95985 ANO7L1-203ENST00000602586 1720 ntBASIC18.94■□□□□ 0.62
TOP3BO95985 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TOP3BO95985 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TOP3BO95985 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.94■□□□□ 0.62
TOP3BO95985 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TOP3BO95985 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.94■□□□□ 0.62
TOP3BO95985 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TOP3BO95985 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms