Protein–RNA interactions for Protein: O95970

LGI1, Leucine-rich glioma-inactivated protein 1, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGI1O95970 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.12■□□□□ 0.33
LGI1O95970 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LGI1O95970 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGI1O95970 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
LGI1O95970 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGI1O95970 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGI1O95970 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LGI1O95970 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.12■□□□□ 0.33
LGI1O95970 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGI1O95970 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
LGI1O95970 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.11■□□□□ 0.33
LGI1O95970 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LGI1O95970 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LGI1O95970 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGI1O95970 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGI1O95970 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.11■□□□□ 0.33
LGI1O95970 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LGI1O95970 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.11■□□□□ 0.33
LGI1O95970 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGI1O95970 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGI1O95970 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LGI1O95970 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.11■□□□□ 0.33
LGI1O95970 RPS2P55-201ENST00000397318 883 ntBASIC17.11■□□□□ 0.33
LGI1O95970 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC17.11■□□□□ 0.33
LGI1O95970 AL023284.2-201ENST00000405850 579 ntBASIC17.11■□□□□ 0.33
LGI1O95970 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
LGI1O95970 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGI1O95970 AC107956.1-201ENST00000494359 873 ntBASIC17.11■□□□□ 0.33
LGI1O95970 AC116562.2-201ENST00000507042 360 ntBASIC17.11■□□□□ 0.33
LGI1O95970 AC093827.2-201ENST00000512654 315 ntBASIC17.11■□□□□ 0.33
LGI1O95970 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.11■□□□□ 0.33
LGI1O95970 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.11■□□□□ 0.33
LGI1O95970 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.11■□□□□ 0.33
LGI1O95970 Z99916.2-201ENST00000604037 246 ntBASIC17.11■□□□□ 0.33
LGI1O95970 DGCR10-201ENST00000609839 495 ntBASIC17.11■□□□□ 0.33
LGI1O95970 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.11■□□□□ 0.33
LGI1O95970 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGI1O95970 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.11■□□□□ 0.33
LGI1O95970 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGI1O95970 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
LGI1O95970 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGI1O95970 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LGI1O95970 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGI1O95970 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGI1O95970 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGI1O95970 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGI1O95970 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LGI1O95970 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGI1O95970 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGI1O95970 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.1■□□□□ 0.33
LGI1O95970 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LGI1O95970 AC008764.6-201ENST00000595909 2069 ntBASIC17.1■□□□□ 0.33
LGI1O95970 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LGI1O95970 AP000593.1-201ENST00000393668 712 ntBASIC17.1■□□□□ 0.33
LGI1O95970 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.1■□□□□ 0.33
LGI1O95970 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LGI1O95970 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.1■□□□□ 0.33
LGI1O95970 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.1■□□□□ 0.33
LGI1O95970 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.1■□□□□ 0.33
LGI1O95970 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.1■□□□□ 0.33
LGI1O95970 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.1■□□□□ 0.33
LGI1O95970 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.1■□□□□ 0.33
LGI1O95970 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGI1O95970 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGI1O95970 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGI1O95970 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
LGI1O95970 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGI1O95970 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LGI1O95970 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
LGI1O95970 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LGI1O95970 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LGI1O95970 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
LGI1O95970 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.1■□□□□ 0.33
LGI1O95970 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.1■□□□□ 0.33
LGI1O95970 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.1■□□□□ 0.33
LGI1O95970 ESPNP-201ENST00000270691 2015 ntBASIC17.09■□□□□ 0.33
LGI1O95970 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGI1O95970 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGI1O95970 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.09■□□□□ 0.33
LGI1O95970 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
LGI1O95970 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.09■□□□□ 0.33
LGI1O95970 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGI1O95970 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGI1O95970 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGI1O95970 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.09■□□□□ 0.33
LGI1O95970 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
LGI1O95970 MIR718-201ENST00000390190 70 ntBASIC17.09■□□□□ 0.33
LGI1O95970 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGI1O95970 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.09■□□□□ 0.33
LGI1O95970 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGI1O95970 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
LGI1O95970 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGI1O95970 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LGI1O95970 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGI1O95970 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.09■□□□□ 0.33
LGI1O95970 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LGI1O95970 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LGI1O95970 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
LGI1O95970 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.09■□□□□ 0.33
LGI1O95970 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms