Protein–RNA interactions for Protein: O94911

ABCA8, ATP-binding cassette sub-family A member 8, humanhuman

Predictions only

Length 1,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8O94911 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
ABCA8O94911 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC28.74■■■□□ 2.19
ABCA8O94911 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC28.74■■■□□ 2.19
ABCA8O94911 FIS1-203ENST00000442303 631 ntTSL 3 BASIC28.74■■■□□ 2.19
ABCA8O94911 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC28.74■■■□□ 2.19
ABCA8O94911 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC28.74■■■□□ 2.19
ABCA8O94911 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC28.74■■■□□ 2.19
ABCA8O94911 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
ABCA8O94911 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
ABCA8O94911 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC28.73■■■□□ 2.19
ABCA8O94911 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
ABCA8O94911 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC28.73■■■□□ 2.19
ABCA8O94911 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ABCA8O94911 AL137060.1-201ENST00000618151 2648 ntBASIC28.73■■■□□ 2.19
ABCA8O94911 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ABCA8O94911 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC28.73■■■□□ 2.19
ABCA8O94911 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC28.73■■■□□ 2.19
ABCA8O94911 RNA5SP415-201ENST00000517246 115 ntBASIC28.73■■■□□ 2.19
ABCA8O94911 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
ABCA8O94911 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC28.73■■■□□ 2.19
ABCA8O94911 CAND2-206ENST00000626378 333 ntTSL 5 BASIC28.73■■■□□ 2.19
ABCA8O94911 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC28.73■■■□□ 2.19
ABCA8O94911 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC28.73■■■□□ 2.19
ABCA8O94911 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
ABCA8O94911 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC28.73■■■□□ 2.19
ABCA8O94911 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
ABCA8O94911 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA8O94911 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC28.72■■■□□ 2.19
ABCA8O94911 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA8O94911 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA8O94911 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC28.72■■■□□ 2.19
ABCA8O94911 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA8O94911 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC28.72■■■□□ 2.19
ABCA8O94911 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA8O94911 OR7E14P-202ENST00000530490 1290 ntBASIC28.72■■■□□ 2.19
ABCA8O94911 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA8O94911 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA8O94911 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA8O94911 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC28.72■■■□□ 2.19
ABCA8O94911 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA8O94911 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA8O94911 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ABCA8O94911 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCA8O94911 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCA8O94911 RAB17-203ENST00000409576 466 ntTSL 3 BASIC28.71■■■□□ 2.19
ABCA8O94911 AC092910.1-201ENST00000482027 1129 ntBASIC28.71■■■□□ 2.19
ABCA8O94911 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCA8O94911 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCA8O94911 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCA8O94911 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC28.71■■■□□ 2.19
ABCA8O94911 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCA8O94911 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCA8O94911 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCA8O94911 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCA8O94911 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC28.71■■■□□ 2.19
ABCA8O94911 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC28.71■■■□□ 2.19
ABCA8O94911 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC28.71■■■□□ 2.19
ABCA8O94911 AL139424.1-201ENST00000607572 797 ntBASIC28.71■■■□□ 2.19
ABCA8O94911 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC28.71■■■□□ 2.19
ABCA8O94911 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC28.71■■■□□ 2.19
ABCA8O94911 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC28.7■■■□□ 2.19
ABCA8O94911 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
ABCA8O94911 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
ABCA8O94911 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC28.7■■■□□ 2.18
ABCA8O94911 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
ABCA8O94911 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC28.7■■■□□ 2.18
ABCA8O94911 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
ABCA8O94911 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
ABCA8O94911 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC28.7■■■□□ 2.18
ABCA8O94911 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
ABCA8O94911 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
ABCA8O94911 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC28.7■■■□□ 2.18
ABCA8O94911 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ABCA8O94911 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC28.69■■■□□ 2.18
ABCA8O94911 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC28.69■■■□□ 2.18
ABCA8O94911 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC28.69■■■□□ 2.18
ABCA8O94911 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
ABCA8O94911 HLA-J-201ENST00000462773 1622 ntBASIC28.69■■■□□ 2.18
ABCA8O94911 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
ABCA8O94911 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC28.69■■■□□ 2.18
ABCA8O94911 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
ABCA8O94911 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ABCA8O94911 KIRREL3-AS3-201ENST00000404882 831 ntBASIC28.69■■■□□ 2.18
ABCA8O94911 AC004967.1-201ENST00000453589 447 ntBASIC28.69■■■□□ 2.18
ABCA8O94911 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
ABCA8O94911 AC009154.2-201ENST00000621177 724 ntBASIC28.69■■■□□ 2.18
ABCA8O94911 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC28.69■■■□□ 2.18
ABCA8O94911 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ABCA8O94911 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC28.68■■■□□ 2.18
ABCA8O94911 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ABCA8O94911 AC009102.3-201ENST00000623118 1491 ntBASIC28.68■■■□□ 2.18
ABCA8O94911 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ABCA8O94911 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
ABCA8O94911 AC004832.2-201ENST00000426397 482 ntBASIC28.68■■■□□ 2.18
ABCA8O94911 AC040169.1-201ENST00000565382 521 ntBASIC28.68■■■□□ 2.18
ABCA8O94911 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC28.68■■■□□ 2.18
ABCA8O94911 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC28.68■■■□□ 2.18
ABCA8O94911 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
ABCA8O94911 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC28.67■■■□□ 2.18
ABCA8O94911 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms