Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LTN1O94822 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC24.5■■□□□ 1.51
LTN1O94822 AC009102.3-201ENST00000623118 1491 ntBASIC24.5■■□□□ 1.51
LTN1O94822 AC099343.3-201ENST00000605834 2503 ntBASIC24.5■■□□□ 1.51
LTN1O94822 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
LTN1O94822 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.5■■□□□ 1.51
LTN1O94822 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LTN1O94822 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC24.5■■□□□ 1.51
LTN1O94822 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
LTN1O94822 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LTN1O94822 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
LTN1O94822 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC24.5■■□□□ 1.51
LTN1O94822 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
LTN1O94822 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LTN1O94822 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC24.49■■□□□ 1.51
LTN1O94822 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC24.49■■□□□ 1.51
LTN1O94822 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC24.49■■□□□ 1.51
LTN1O94822 AC083906.6-201ENST00000641366 219 ntBASIC24.49■■□□□ 1.51
LTN1O94822 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LTN1O94822 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC24.49■■□□□ 1.51
LTN1O94822 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
LTN1O94822 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LTN1O94822 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LTN1O94822 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
LTN1O94822 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LTN1O94822 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC24.49■■□□□ 1.51
LTN1O94822 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC24.49■■□□□ 1.51
LTN1O94822 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC24.49■■□□□ 1.51
LTN1O94822 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LTN1O94822 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
LTN1O94822 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
LTN1O94822 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LTN1O94822 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC24.48■■□□□ 1.51
LTN1O94822 TLE1-202ENST00000376484 666 ntTSL 3 BASIC24.48■■□□□ 1.51
LTN1O94822 AL031284.1-201ENST00000419297 478 ntBASIC24.48■■□□□ 1.51
LTN1O94822 AL590627.1-203ENST00000421194 1026 ntBASIC24.48■■□□□ 1.51
LTN1O94822 MEG3-211ENST00000452514 461 ntTSL 3 BASIC24.48■■□□□ 1.51
LTN1O94822 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC24.48■■□□□ 1.51
LTN1O94822 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC24.48■■□□□ 1.51
LTN1O94822 AF228730.7-201ENST00000641842 219 ntBASIC24.48■■□□□ 1.51
LTN1O94822 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC24.48■■□□□ 1.51
LTN1O94822 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC24.48■■□□□ 1.51
LTN1O94822 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LTN1O94822 AC007952.6-201ENST00000573168 2673 ntBASIC24.48■■□□□ 1.51
LTN1O94822 AC003957.1-201ENST00000625108 2673 ntBASIC24.48■■□□□ 1.51
LTN1O94822 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC24.48■■□□□ 1.51
LTN1O94822 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LTN1O94822 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LTN1O94822 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LTN1O94822 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC24.47■■□□□ 1.51
LTN1O94822 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LTN1O94822 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC24.47■■□□□ 1.51
LTN1O94822 FGFR3P6-201ENST00000457012 610 ntBASIC24.47■■□□□ 1.51
LTN1O94822 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC24.47■■□□□ 1.51
LTN1O94822 ASL-204ENST00000395331 1538 ntTSL 5 BASIC24.47■■□□□ 1.51
LTN1O94822 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LTN1O94822 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC24.47■■□□□ 1.51
LTN1O94822 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC24.47■■□□□ 1.51
LTN1O94822 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LTN1O94822 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC24.47■■□□□ 1.51
LTN1O94822 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC24.47■■□□□ 1.51
LTN1O94822 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LTN1O94822 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC24.47■■□□□ 1.51
LTN1O94822 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC24.47■■□□□ 1.51
LTN1O94822 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC24.47■■□□□ 1.51
LTN1O94822 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LTN1O94822 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC24.47■■□□□ 1.51
LTN1O94822 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
LTN1O94822 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
LTN1O94822 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
LTN1O94822 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC24.46■■□□□ 1.51
LTN1O94822 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
LTN1O94822 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC24.46■■□□□ 1.51
LTN1O94822 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
LTN1O94822 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LTN1O94822 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LTN1O94822 SDHAP2-201ENST00000455183 2001 ntBASIC24.46■■□□□ 1.51
LTN1O94822 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LTN1O94822 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC24.46■■□□□ 1.51
LTN1O94822 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC24.46■■□□□ 1.51
LTN1O94822 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC24.46■■□□□ 1.51
LTN1O94822 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
LTN1O94822 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
LTN1O94822 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
LTN1O94822 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
LTN1O94822 AC112777.1-201ENST00000540175 1423 ntBASIC24.45■■□□□ 1.51
LTN1O94822 AL499627.1-201ENST00000569373 2188 ntBASIC24.45■■□□□ 1.5
LTN1O94822 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LTN1O94822 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC24.45■■□□□ 1.5
LTN1O94822 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LTN1O94822 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC24.45■■□□□ 1.5
LTN1O94822 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC24.45■■□□□ 1.5
LTN1O94822 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC24.45■■□□□ 1.5
LTN1O94822 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LTN1O94822 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
LTN1O94822 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC24.45■■□□□ 1.5
LTN1O94822 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
LTN1O94822 POM121L3P-201ENST00000419331 1163 ntBASIC24.45■■□□□ 1.5
LTN1O94822 THAP5-204ENST00000438865 868 ntTSL 2 BASIC24.45■■□□□ 1.5
LTN1O94822 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms