Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.93■□□□□ 0.46
GFRA3O60609 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GFRA3O60609 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.93■□□□□ 0.46
GFRA3O60609 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
GFRA3O60609 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
GFRA3O60609 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
GFRA3O60609 GOLGA6L17P-202ENST00000614358 1398 ntBASIC17.92■□□□□ 0.46
GFRA3O60609 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
GFRA3O60609 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GFRA3O60609 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
GFRA3O60609 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
GFRA3O60609 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
GFRA3O60609 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GFRA3O60609 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GFRA3O60609 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
GFRA3O60609 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC17.92■□□□□ 0.46
GFRA3O60609 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GFRA3O60609 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GFRA3O60609 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC17.92■□□□□ 0.46
GFRA3O60609 AC093214.1-201ENST00000511688 1107 ntBASIC17.92■□□□□ 0.46
GFRA3O60609 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.92■□□□□ 0.46
GFRA3O60609 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.92■□□□□ 0.46
GFRA3O60609 AC007225.1-201ENST00000566331 1836 ntBASIC17.92■□□□□ 0.46
GFRA3O60609 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.92■□□□□ 0.46
GFRA3O60609 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GFRA3O60609 GPR89P-201ENST00000407924 1495 ntBASIC17.92■□□□□ 0.46
GFRA3O60609 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GFRA3O60609 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.91■□□□□ 0.46
GFRA3O60609 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.91■□□□□ 0.46
GFRA3O60609 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC17.91■□□□□ 0.46
GFRA3O60609 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC17.91■□□□□ 0.46
GFRA3O60609 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.91■□□□□ 0.46
GFRA3O60609 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.91■□□□□ 0.46
GFRA3O60609 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 CRYGEP-201ENST00000412192 528 ntBASIC17.91■□□□□ 0.46
GFRA3O60609 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.91■□□□□ 0.46
GFRA3O60609 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.91■□□□□ 0.46
GFRA3O60609 AC018845.2-201ENST00000568326 409 ntBASIC17.91■□□□□ 0.46
GFRA3O60609 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
GFRA3O60609 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC17.91■□□□□ 0.46
GFRA3O60609 AC004835.2-201ENST00000603762 682 ntBASIC17.91■□□□□ 0.46
GFRA3O60609 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
GFRA3O60609 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GFRA3O60609 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GFRA3O60609 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
GFRA3O60609 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GFRA3O60609 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GFRA3O60609 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GFRA3O60609 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
GFRA3O60609 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.9■□□□□ 0.46
GFRA3O60609 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GFRA3O60609 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.9■□□□□ 0.46
GFRA3O60609 AC236430.1-201ENST00000402231 743 ntBASIC17.9■□□□□ 0.46
GFRA3O60609 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GFRA3O60609 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.9■□□□□ 0.46
GFRA3O60609 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.9■□□□□ 0.46
GFRA3O60609 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.9■□□□□ 0.46
GFRA3O60609 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.9■□□□□ 0.46
GFRA3O60609 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.9■□□□□ 0.46
GFRA3O60609 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC17.9■□□□□ 0.46
GFRA3O60609 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.9■□□□□ 0.46
GFRA3O60609 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GFRA3O60609 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
GFRA3O60609 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GFRA3O60609 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GFRA3O60609 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.9■□□□□ 0.46
GFRA3O60609 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
GFRA3O60609 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
GFRA3O60609 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
GFRA3O60609 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.89■□□□□ 0.46
GFRA3O60609 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
GFRA3O60609 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.89■□□□□ 0.46
GFRA3O60609 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
GFRA3O60609 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GFRA3O60609 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GFRA3O60609 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GFRA3O60609 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
GFRA3O60609 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GFRA3O60609 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC17.89■□□□□ 0.45
GFRA3O60609 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.89■□□□□ 0.45
GFRA3O60609 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
GFRA3O60609 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC17.89■□□□□ 0.45
GFRA3O60609 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GFRA3O60609 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms