Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.02■□□□□ 0.96
CCNT1O60563 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCNT1O60563 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCNT1O60563 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCNT1O60563 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
CCNT1O60563 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC21.02■□□□□ 0.96
CCNT1O60563 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
CCNT1O60563 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCNT1O60563 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
CCNT1O60563 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.02■□□□□ 0.95
CCNT1O60563 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC21.02■□□□□ 0.95
CCNT1O60563 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
CCNT1O60563 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCNT1O60563 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCNT1O60563 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.01■□□□□ 0.95
CCNT1O60563 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC21.01■□□□□ 0.95
CCNT1O60563 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
CCNT1O60563 AL163051.1-201ENST00000569214 1512 ntBASIC21.01■□□□□ 0.95
CCNT1O60563 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCNT1O60563 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CCNT1O60563 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCNT1O60563 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCNT1O60563 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCNT1O60563 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.01■□□□□ 0.95
CCNT1O60563 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC21.01■□□□□ 0.95
CCNT1O60563 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCNT1O60563 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC21.01■□□□□ 0.95
CCNT1O60563 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCNT1O60563 AC010240.3-201ENST00000607688 395 ntBASIC21.01■□□□□ 0.95
CCNT1O60563 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCNT1O60563 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCNT1O60563 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.01■□□□□ 0.95
CCNT1O60563 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCNT1O60563 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
CCNT1O60563 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCNT1O60563 AC073592.3-201ENST00000625118 1834 ntBASIC21.01■□□□□ 0.95
CCNT1O60563 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.01■□□□□ 0.95
CCNT1O60563 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
CCNT1O60563 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
CCNT1O60563 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
CCNT1O60563 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCNT1O60563 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
CCNT1O60563 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCNT1O60563 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCNT1O60563 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCNT1O60563 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCNT1O60563 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCNT1O60563 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21■□□□□ 0.95
CCNT1O60563 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC21■□□□□ 0.95
CCNT1O60563 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
CCNT1O60563 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC21■□□□□ 0.95
CCNT1O60563 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCNT1O60563 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21■□□□□ 0.95
CCNT1O60563 AK4P3-201ENST00000418260 669 ntBASIC21■□□□□ 0.95
CCNT1O60563 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC21■□□□□ 0.95
CCNT1O60563 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC21■□□□□ 0.95
CCNT1O60563 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
CCNT1O60563 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCNT1O60563 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
CCNT1O60563 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC21■□□□□ 0.95
CCNT1O60563 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
CCNT1O60563 AC009113.1-201ENST00000570267 2443 ntBASIC21■□□□□ 0.95
CCNT1O60563 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21■□□□□ 0.95
CCNT1O60563 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCNT1O60563 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
CCNT1O60563 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21■□□□□ 0.95
CCNT1O60563 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC21■□□□□ 0.95
CCNT1O60563 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC21■□□□□ 0.95
CCNT1O60563 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC21■□□□□ 0.95
CCNT1O60563 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21■□□□□ 0.95
CCNT1O60563 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
CCNT1O60563 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
CCNT1O60563 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
CCNT1O60563 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.99■□□□□ 0.95
CCNT1O60563 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.99■□□□□ 0.95
CCNT1O60563 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CCNT1O60563 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
CCNT1O60563 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
CCNT1O60563 FAM210CP-201ENST00000445714 574 ntBASIC20.99■□□□□ 0.95
CCNT1O60563 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.99■□□□□ 0.95
CCNT1O60563 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.99■□□□□ 0.95
CCNT1O60563 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.99■□□□□ 0.95
CCNT1O60563 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.99■□□□□ 0.95
CCNT1O60563 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.99■□□□□ 0.95
CCNT1O60563 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.99■□□□□ 0.95
CCNT1O60563 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CCNT1O60563 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms