Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.53■□□□□ 0.56
MID1O15344 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC18.53■□□□□ 0.56
MID1O15344 AL390719.2-201ENST00000606993 987 ntBASIC18.53■□□□□ 0.56
MID1O15344 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MID1O15344 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
MID1O15344 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MID1O15344 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
MID1O15344 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
MID1O15344 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
MID1O15344 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MID1O15344 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
MID1O15344 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
MID1O15344 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
MID1O15344 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MID1O15344 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MID1O15344 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.52■□□□□ 0.56
MID1O15344 KRT18P41-201ENST00000518924 1277 ntBASIC18.52■□□□□ 0.56
MID1O15344 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.52■□□□□ 0.56
MID1O15344 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.52■□□□□ 0.56
MID1O15344 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.52■□□□□ 0.56
MID1O15344 AC024563.2-201ENST00000603282 481 ntBASIC18.52■□□□□ 0.56
MID1O15344 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
MID1O15344 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC18.52■□□□□ 0.56
MID1O15344 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
MID1O15344 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
MID1O15344 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MID1O15344 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
MID1O15344 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.55
MID1O15344 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
MID1O15344 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.52■□□□□ 0.55
MID1O15344 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MID1O15344 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.51■□□□□ 0.55
MID1O15344 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.51■□□□□ 0.55
MID1O15344 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MID1O15344 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.51■□□□□ 0.55
MID1O15344 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
MID1O15344 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.51■□□□□ 0.55
MID1O15344 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
MID1O15344 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MID1O15344 AL163051.1-201ENST00000569214 1512 ntBASIC18.51■□□□□ 0.55
MID1O15344 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MID1O15344 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MID1O15344 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.51■□□□□ 0.55
MID1O15344 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.51■□□□□ 0.55
MID1O15344 LINC00265-3P-201ENST00000447588 903 ntBASIC18.51■□□□□ 0.55
MID1O15344 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.51■□□□□ 0.55
MID1O15344 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.51■□□□□ 0.55
MID1O15344 TPSP2-201ENST00000561760 610 ntBASIC18.51■□□□□ 0.55
MID1O15344 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
MID1O15344 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.51■□□□□ 0.55
MID1O15344 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
MID1O15344 GPR32P1-201ENST00000601788 811 ntBASIC18.51■□□□□ 0.55
MID1O15344 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.51■□□□□ 0.55
MID1O15344 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.51■□□□□ 0.55
MID1O15344 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MID1O15344 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MID1O15344 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
MID1O15344 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MID1O15344 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MID1O15344 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
MID1O15344 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
MID1O15344 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
MID1O15344 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
MID1O15344 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
MID1O15344 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MID1O15344 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.5■□□□□ 0.55
MID1O15344 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.5■□□□□ 0.55
MID1O15344 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.5■□□□□ 0.55
MID1O15344 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.5■□□□□ 0.55
MID1O15344 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MID1O15344 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MID1O15344 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MID1O15344 AP000593.1-201ENST00000393668 712 ntBASIC18.5■□□□□ 0.55
MID1O15344 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.5■□□□□ 0.55
MID1O15344 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MID1O15344 DRAXINP1-201ENST00000437611 948 ntBASIC18.5■□□□□ 0.55
MID1O15344 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
MID1O15344 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MID1O15344 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.5■□□□□ 0.55
MID1O15344 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.5■□□□□ 0.55
MID1O15344 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.5■□□□□ 0.55
MID1O15344 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.5■□□□□ 0.55
MID1O15344 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.5■□□□□ 0.55
MID1O15344 AL691432.3-201ENST00000621860 400 ntBASIC18.5■□□□□ 0.55
MID1O15344 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.5■□□□□ 0.55
MID1O15344 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
MID1O15344 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MID1O15344 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
MID1O15344 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MID1O15344 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
MID1O15344 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
MID1O15344 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MID1O15344 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.5■□□□□ 0.55
MID1O15344 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MID1O15344 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MID1O15344 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.5■□□□□ 0.55
MID1O15344 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
MID1O15344 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MID1O15344 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
MID1O15344 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms