Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
UBFD1O14562 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.98■□□□□ 0.47
UBFD1O14562 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.98■□□□□ 0.47
UBFD1O14562 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.98■□□□□ 0.47
UBFD1O14562 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.98■□□□□ 0.47
UBFD1O14562 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.98■□□□□ 0.47
UBFD1O14562 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.98■□□□□ 0.47
UBFD1O14562 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.98■□□□□ 0.47
UBFD1O14562 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
UBFD1O14562 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
UBFD1O14562 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.98■□□□□ 0.47
UBFD1O14562 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.98■□□□□ 0.47
UBFD1O14562 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
UBFD1O14562 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
UBFD1O14562 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
UBFD1O14562 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
UBFD1O14562 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
UBFD1O14562 KRT8P50-201ENST00000562022 1438 ntBASIC17.98■□□□□ 0.47
UBFD1O14562 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
UBFD1O14562 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBFD1O14562 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBFD1O14562 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBFD1O14562 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBFD1O14562 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBFD1O14562 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBFD1O14562 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.97■□□□□ 0.47
UBFD1O14562 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBFD1O14562 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBFD1O14562 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBFD1O14562 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
UBFD1O14562 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBFD1O14562 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.97■□□□□ 0.47
UBFD1O14562 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.97■□□□□ 0.47
UBFD1O14562 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.97■□□□□ 0.47
UBFD1O14562 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBFD1O14562 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBFD1O14562 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.97■□□□□ 0.47
UBFD1O14562 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.97■□□□□ 0.47
UBFD1O14562 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBFD1O14562 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.97■□□□□ 0.47
UBFD1O14562 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.97■□□□□ 0.47
UBFD1O14562 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.97■□□□□ 0.47
UBFD1O14562 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.97■□□□□ 0.47
UBFD1O14562 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.97■□□□□ 0.47
UBFD1O14562 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.97■□□□□ 0.47
UBFD1O14562 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.97■□□□□ 0.47
UBFD1O14562 FAM197Y4-202ENST00000622692 608 ntBASIC17.97■□□□□ 0.47
UBFD1O14562 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.97■□□□□ 0.47
UBFD1O14562 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
UBFD1O14562 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.97■□□□□ 0.47
UBFD1O14562 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
UBFD1O14562 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBFD1O14562 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBFD1O14562 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBFD1O14562 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.96■□□□□ 0.47
UBFD1O14562 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.96■□□□□ 0.47
UBFD1O14562 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBFD1O14562 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.96■□□□□ 0.47
UBFD1O14562 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBFD1O14562 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
UBFD1O14562 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBFD1O14562 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBFD1O14562 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBFD1O14562 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
UBFD1O14562 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
UBFD1O14562 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.96■□□□□ 0.47
UBFD1O14562 AC116562.2-201ENST00000507042 360 ntBASIC17.96■□□□□ 0.47
UBFD1O14562 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.96■□□□□ 0.47
UBFD1O14562 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.96■□□□□ 0.47
UBFD1O14562 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBFD1O14562 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.96■□□□□ 0.47
UBFD1O14562 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBFD1O14562 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBFD1O14562 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBFD1O14562 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBFD1O14562 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
UBFD1O14562 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
UBFD1O14562 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.96■□□□□ 0.46
UBFD1O14562 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.96■□□□□ 0.46
UBFD1O14562 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.95■□□□□ 0.46
UBFD1O14562 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
UBFD1O14562 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
UBFD1O14562 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
UBFD1O14562 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBFD1O14562 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBFD1O14562 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
UBFD1O14562 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBFD1O14562 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.95■□□□□ 0.46
UBFD1O14562 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
UBFD1O14562 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.95■□□□□ 0.46
UBFD1O14562 LINC00896-202ENST00000609602 2128 ntBASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms