Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 AC087499.1-201ENST00000418141 1075 ntBASIC18.11■□□□□ 0.49
EIF3FO00303 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
EIF3FO00303 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
EIF3FO00303 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.11■□□□□ 0.49
EIF3FO00303 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.11■□□□□ 0.49
EIF3FO00303 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
EIF3FO00303 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EIF3FO00303 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.11■□□□□ 0.49
EIF3FO00303 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EIF3FO00303 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.11■□□□□ 0.49
EIF3FO00303 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.11■□□□□ 0.49
EIF3FO00303 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EIF3FO00303 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
EIF3FO00303 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EIF3FO00303 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EIF3FO00303 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.11■□□□□ 0.49
EIF3FO00303 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EIF3FO00303 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.11■□□□□ 0.49
EIF3FO00303 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
EIF3FO00303 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.11■□□□□ 0.49
EIF3FO00303 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
EIF3FO00303 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EIF3FO00303 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EIF3FO00303 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EIF3FO00303 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
EIF3FO00303 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
EIF3FO00303 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EIF3FO00303 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.1■□□□□ 0.49
EIF3FO00303 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
EIF3FO00303 AC009102.3-201ENST00000623118 1491 ntBASIC18.1■□□□□ 0.49
EIF3FO00303 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.1■□□□□ 0.49
EIF3FO00303 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EIF3FO00303 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EIF3FO00303 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.1■□□□□ 0.49
EIF3FO00303 ECEL1P2-202ENST00000465689 757 ntBASIC18.1■□□□□ 0.49
EIF3FO00303 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
EIF3FO00303 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
EIF3FO00303 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.1■□□□□ 0.49
EIF3FO00303 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
EIF3FO00303 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
EIF3FO00303 AC104581.1-202ENST00000635932 2618 ntBASIC18.1■□□□□ 0.49
EIF3FO00303 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
EIF3FO00303 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EIF3FO00303 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
EIF3FO00303 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EIF3FO00303 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
EIF3FO00303 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
EIF3FO00303 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EIF3FO00303 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EIF3FO00303 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
EIF3FO00303 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EIF3FO00303 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EIF3FO00303 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.09■□□□□ 0.49
EIF3FO00303 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EIF3FO00303 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.09■□□□□ 0.49
EIF3FO00303 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.09■□□□□ 0.49
EIF3FO00303 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.09■□□□□ 0.49
EIF3FO00303 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.09■□□□□ 0.49
EIF3FO00303 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
EIF3FO00303 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EIF3FO00303 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EIF3FO00303 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EIF3FO00303 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
EIF3FO00303 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
EIF3FO00303 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.08■□□□□ 0.49
EIF3FO00303 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
EIF3FO00303 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
EIF3FO00303 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
EIF3FO00303 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EIF3FO00303 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
EIF3FO00303 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EIF3FO00303 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.08■□□□□ 0.49
EIF3FO00303 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
EIF3FO00303 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
EIF3FO00303 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
EIF3FO00303 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
EIF3FO00303 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.08■□□□□ 0.49
EIF3FO00303 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
EIF3FO00303 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
EIF3FO00303 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
EIF3FO00303 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.08■□□□□ 0.48
EIF3FO00303 ECEL1P3-201ENST00000427961 737 ntBASIC18.08■□□□□ 0.48
EIF3FO00303 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.08■□□□□ 0.48
EIF3FO00303 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
EIF3FO00303 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.08■□□□□ 0.48
EIF3FO00303 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.08■□□□□ 0.48
EIF3FO00303 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.08■□□□□ 0.48
EIF3FO00303 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
EIF3FO00303 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
EIF3FO00303 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
EIF3FO00303 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
EIF3FO00303 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
EIF3FO00303 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
EIF3FO00303 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
EIF3FO00303 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.08■□□□□ 0.48
EIF3FO00303 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.07■□□□□ 0.48
EIF3FO00303 AL354751.1-201ENST00000412768 1863 ntBASIC18.07■□□□□ 0.48
EIF3FO00303 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.07■□□□□ 0.48
EIF3FO00303 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
EIF3FO00303 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms