Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX39AO00148 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.83■□□□□ 0.93
DDX39AO00148 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.83■□□□□ 0.93
DDX39AO00148 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
DDX39AO00148 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.83■□□□□ 0.92
DDX39AO00148 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.83■□□□□ 0.92
DDX39AO00148 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
DDX39AO00148 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
DDX39AO00148 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
DDX39AO00148 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX39AO00148 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX39AO00148 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC20.82■□□□□ 0.92
DDX39AO00148 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX39AO00148 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
DDX39AO00148 AL645929.1-201ENST00000420084 975 ntBASIC20.82■□□□□ 0.92
DDX39AO00148 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.82■□□□□ 0.92
DDX39AO00148 AC116407.4-201ENST00000623319 1061 ntBASIC20.82■□□□□ 0.92
DDX39AO00148 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX39AO00148 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX39AO00148 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX39AO00148 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
DDX39AO00148 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX39AO00148 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX39AO00148 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC20.82■□□□□ 0.92
DDX39AO00148 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
DDX39AO00148 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX39AO00148 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX39AO00148 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX39AO00148 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX39AO00148 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX39AO00148 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX39AO00148 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX39AO00148 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX39AO00148 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX39AO00148 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX39AO00148 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX39AO00148 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX39AO00148 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.81■□□□□ 0.92
DDX39AO00148 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.81■□□□□ 0.92
DDX39AO00148 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX39AO00148 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX39AO00148 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.81■□□□□ 0.92
DDX39AO00148 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
DDX39AO00148 AC005082.1-201ENST00000413042 2259 ntBASIC20.81■□□□□ 0.92
DDX39AO00148 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
DDX39AO00148 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX39AO00148 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
DDX39AO00148 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC20.81■□□□□ 0.92
DDX39AO00148 AC087289.5-201ENST00000586076 3175 ntBASIC20.81■□□□□ 0.92
DDX39AO00148 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX39AO00148 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
DDX39AO00148 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX39AO00148 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX39AO00148 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX39AO00148 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX39AO00148 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX39AO00148 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX39AO00148 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.8■□□□□ 0.92
DDX39AO00148 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX39AO00148 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC20.8■□□□□ 0.92
DDX39AO00148 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
DDX39AO00148 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.8■□□□□ 0.92
DDX39AO00148 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX39AO00148 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
DDX39AO00148 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX39AO00148 PBK-203ENST00000522944 1499 ntTSL 2 BASIC20.8■□□□□ 0.92
DDX39AO00148 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX39AO00148 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX39AO00148 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.8■□□□□ 0.92
DDX39AO00148 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX39AO00148 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
DDX39AO00148 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
DDX39AO00148 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX39AO00148 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX39AO00148 AC020763.4-201ENST00000623414 4170 ntBASIC20.79■□□□□ 0.92
DDX39AO00148 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
DDX39AO00148 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
DDX39AO00148 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX39AO00148 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
DDX39AO00148 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX39AO00148 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
DDX39AO00148 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX39AO00148 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX39AO00148 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
DDX39AO00148 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX39AO00148 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
DDX39AO00148 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.79■□□□□ 0.92
DDX39AO00148 HLA-F-220ENST00000434407 884 ntBASIC20.79■□□□□ 0.92
DDX39AO00148 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX39AO00148 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX39AO00148 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.79■□□□□ 0.92
DDX39AO00148 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC20.79■□□□□ 0.92
DDX39AO00148 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
DDX39AO00148 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
DDX39AO00148 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX39AO00148 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX39AO00148 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.79■□□□□ 0.92
DDX39AO00148 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
DDX39AO00148 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
DDX39AO00148 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms