Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
SHISA3A0PJX4 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 Z85996.1-201ENST00000494644 937 ntBASIC16.15■□□□□ 0.18
SHISA3A0PJX4 PNMA6B-201ENST00000538162 1200 ntBASIC16.15■□□□□ 0.18
SHISA3A0PJX4 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 AC092118.2-201ENST00000613495 667 ntBASIC16.15■□□□□ 0.18
SHISA3A0PJX4 Six3os1_6.1-201ENST00000620790 196 ntBASIC16.15■□□□□ 0.18
SHISA3A0PJX4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 PHGDH-209ENST00000641074 1780 ntBASIC16.15■□□□□ 0.18
SHISA3A0PJX4 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.15■□□□□ 0.18
SHISA3A0PJX4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.18
SHISA3A0PJX4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 AC022517.1-201ENST00000592429 346 ntBASIC16.14■□□□□ 0.17
SHISA3A0PJX4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
SHISA3A0PJX4 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
SHISA3A0PJX4 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms