Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.51■■□□□ 1.35
LOC102724428A0A0B4J2F2 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC23.51■■□□□ 1.35
LOC102724428A0A0B4J2F2 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC23.51■■□□□ 1.35
LOC102724428A0A0B4J2F2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
LOC102724428A0A0B4J2F2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 FAM220CP-201ENST00000395253 831 ntBASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
LOC102724428A0A0B4J2F2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 PGAM5P1-201ENST00000518923 814 ntBASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
LOC102724428A0A0B4J2F2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 PAM16-208ENST00000573553 722 ntTSL 2 BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
LOC102724428A0A0B4J2F2 NARF-204ENST00000390006 1766 ntTSL 2 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 INTS4P1-201ENST00000438455 1935 ntBASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 MIR149-201ENST00000384879 89 ntBASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 IGHV3-22-201ENST00000520721 359 ntBASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 AC145285.3-201ENST00000564603 959 ntBASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC23.47■■□□□ 1.35
LOC102724428A0A0B4J2F2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
LOC102724428A0A0B4J2F2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
LOC102724428A0A0B4J2F2 RPS2P28-201ENST00000314255 741 ntBASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms