Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 F11R-206ENST00000621309 4770 ntTSL 5 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
TRAV13-2A0A0B4J235 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 AC091305.1-201ENST00000479476 895 ntBASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 MAG-206ENST00000597035 542 ntTSL 4 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 AC093677.2-201ENST00000600169 1863 ntBASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
TRAV13-2A0A0B4J235 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 KRT8P8-201ENST00000434750 1448 ntBASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 GCK-205ENST00000437084 1385 ntTSL 5 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 EDA-201ENST00000338901 1233 ntBASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 AP001330.3-201ENST00000520123 633 ntBASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 AC108860.2-201ENST00000562760 2183 ntBASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 AL023806.1-201ENST00000603994 1649 ntBASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
TRAV13-2A0A0B4J235 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms