Protein–RNA interactions for Protein: Q9Y5I4

PCDHAC2, Protocadherin alpha-C2, humanhuman

Predictions only

Length 1,007 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHAC2Q9Y5I4 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 AL590627.1-203ENST00000421194 1026 ntBASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 MINOS1P3-201ENST00000457048 203 ntBASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 SLC25A1P1-201ENST00000528351 927 ntBASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 GPALPP1-207ENST00000611650 899 ntBASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PCDHAC2Q9Y5I4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 AL163051.1-201ENST00000569214 1512 ntBASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 AF228730.7-201ENST00000641842 219 ntBASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PCDHAC2Q9Y5I4 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 PENK-208ENST00000523051 772 ntTSL 5 BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 AC011840.4-201ENST00000578471 627 ntBASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 BX640515.1-201ENST00000617215 977 ntBASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 KRT89P-201ENST00000620027 1478 ntBASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PCDHAC2Q9Y5I4 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHAC2Q9Y5I4 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHAC2Q9Y5I4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHAC2Q9Y5I4 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHAC2Q9Y5I4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
PCDHAC2Q9Y5I4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.99■■□□□ 1.11
PCDHAC2Q9Y5I4 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHAC2Q9Y5I4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHAC2Q9Y5I4 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHAC2Q9Y5I4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHAC2Q9Y5I4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHAC2Q9Y5I4 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC21.99■■□□□ 1.11
PCDHAC2Q9Y5I4 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHAC2Q9Y5I4 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PCDHAC2Q9Y5I4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 AL161938.1-201ENST00000569833 2180 ntBASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 NARF-204ENST00000390006 1766 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 EMD-201ENST00000369835 966 ntTSL 3 BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PCDHAC2Q9Y5I4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms