Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 HR-201ENST00000312841 5351 ntTSL 5 BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 AL121894.2-201ENST00000602977 491 ntBASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 NPAP1P7-201ENST00000613027 823 ntBASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 AC068587.9-201ENST00000641814 219 ntBASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
CTDP1Q9Y5B0 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 KRT18P1-202ENST00000452408 1331 ntBASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 PRR29-207ENST00000580752 458 ntTSL 3 BASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 AC093484.2-201ENST00000580996 2166 ntBASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 AC012313.10-201ENST00000623509 926 ntBASIC21.42■■□□□ 1.02
CTDP1Q9Y5B0 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 CHCHD2P8-201ENST00000429873 447 ntBASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 AP003733.1-201ENST00000491725 852 ntBASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 MIR3180-4-201ENST00000582223 153 ntBASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 LITAF-220ENST00000620789 692 ntTSL 5 BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.41■■□□□ 1.02
CTDP1Q9Y5B0 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 PVRIG2P-201ENST00000435460 978 ntBASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 NAT14-202ENST00000587400 416 ntTSL 5 BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 AP002414.4-201ENST00000589764 1148 ntBASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 WDR6-223ENST00000627177 207 ntTSL 2 BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.4■■□□□ 1.02
CTDP1Q9Y5B0 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC21.39■■□□□ 1.02
CTDP1Q9Y5B0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CTDP1Q9Y5B0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
CTDP1Q9Y5B0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CTDP1Q9Y5B0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC21.39■■□□□ 1.02
CTDP1Q9Y5B0 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
CTDP1Q9Y5B0 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 Z98044.1-201ENST00000632503 1764 ntBASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC21.39■■□□□ 1.01
CTDP1Q9Y5B0 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms