Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 AC231657.2-201ENST00000624556 255 ntBASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 AL645608.8-201ENST00000606034 2086 ntBASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
RCL1Q9Y2P8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 AC016769.1-201ENST00000409132 1010 ntBASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 AC007322.1-201ENST00000426983 750 ntBASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 MAX-217ENST00000557277 728 ntTSL 3 BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 RAP2CP1-201ENST00000605103 478 ntBASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 AC084018.2-201ENST00000613093 2607 ntBASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 REXO1L9P-201ENST00000604264 2108 ntBASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
RCL1Q9Y2P8 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 AC124067.4-201ENST00000519691 2379 ntBASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 AC034268.1-201ENST00000441047 882 ntBASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 MYC-208ENST00000641036 567 ntBASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
RCL1Q9Y2P8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
RCL1Q9Y2P8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
RCL1Q9Y2P8 RCC2P6-201ENST00000526625 1557 ntBASIC15.15■□□□□ 0.02
RCL1Q9Y2P8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RCL1Q9Y2P8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
RCL1Q9Y2P8 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RCL1Q9Y2P8 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms