Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SATB2Q9UPW6 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.14■□□□□ 0.49
SATB2Q9UPW6 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 RASA4DP-201ENST00000460726 1199 ntBASIC18.13■□□□□ 0.49
SATB2Q9UPW6 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 AC092329.2-201ENST00000598402 547 ntBASIC18.13■□□□□ 0.49
SATB2Q9UPW6 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SATB2Q9UPW6 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 AC092597.1-201ENST00000487352 616 ntBASIC18.12■□□□□ 0.49
SATB2Q9UPW6 AC034232.1-201ENST00000506026 1064 ntBASIC18.12■□□□□ 0.49
SATB2Q9UPW6 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.12■□□□□ 0.49
SATB2Q9UPW6 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 AC246785.2-201ENST00000432512 513 ntBASIC18.11■□□□□ 0.49
SATB2Q9UPW6 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.11■□□□□ 0.49
SATB2Q9UPW6 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms