Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 LBH-202ENST00000401506 485 ntTSL 3 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 ADH5P3-201ENST00000433842 1137 ntBASIC7.57□□□□□ -1.2
MACF1Q9UPN3 FAM58CP-201ENST00000435741 640 ntBASIC7.57□□□□□ -1.2
MACF1Q9UPN3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 AL353135.1-201ENST00000606729 504 ntBASIC7.57□□□□□ -1.2
MACF1Q9UPN3 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 SLC25A39P2-201ENST00000537614 270 ntBASIC7.57□□□□□ -1.2
MACF1Q9UPN3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 AC119751.2-201ENST00000504529 210 ntBASIC7.57□□□□□ -1.2
MACF1Q9UPN3 SERBP1P5-201ENST00000510079 1181 ntBASIC7.57□□□□□ -1.2
MACF1Q9UPN3 CD74-212ENST00000524315 584 ntTSL 5 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 PPA1-206ENST00000625364 644 ntTSL 5 BASIC7.57□□□□□ -1.2
MACF1Q9UPN3 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 DDX43P3-201ENST00000441064 443 ntBASIC7.56□□□□□ -1.2
MACF1Q9UPN3 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 AC125807.1-201ENST00000483097 614 ntBASIC7.56□□□□□ -1.2
MACF1Q9UPN3 TK1-204ENST00000590430 683 ntTSL 3 BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 AC006538.1-201ENST00000567905 1585 ntBASIC7.56□□□□□ -1.2
MACF1Q9UPN3 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 IGHV3-72-202ENST00000621503 303 ntBASIC7.56□□□□□ -1.2
MACF1Q9UPN3 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 AL353692.3-201ENST00000407031 1396 ntBASIC7.56□□□□□ -1.2
MACF1Q9UPN3 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC7.56□□□□□ -1.2
MACF1Q9UPN3 LDHBP1-201ENST00000455730 1119 ntBASIC7.56□□□□□ -1.2
MACF1Q9UPN3 TP53TG3HP-202ENST00000569755 579 ntBASIC7.56□□□□□ -1.2
MACF1Q9UPN3 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms