Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC22.57■■□□□ 1.2
HMG20BQ9P0W2 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC22.57■■□□□ 1.2
HMG20BQ9P0W2 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC22.57■■□□□ 1.2
HMG20BQ9P0W2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HMG20BQ9P0W2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC22.57■■□□□ 1.2
HMG20BQ9P0W2 CYP51A1P1-201ENST00000492267 1507 ntBASIC22.57■■□□□ 1.2
HMG20BQ9P0W2 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.57■■□□□ 1.2
HMG20BQ9P0W2 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HMG20BQ9P0W2 AL391807.1-203ENST00000604392 2365 ntBASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 NDUFV2-AS1-203ENST00000608008 779 ntBASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMG20BQ9P0W2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 AL136038.4-201ENST00000603606 1261 ntBASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 KRT8P50-201ENST00000562022 1438 ntBASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC22.55■■□□□ 1.2
HMG20BQ9P0W2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMG20BQ9P0W2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 AL645929.1-201ENST00000420084 975 ntBASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
HMG20BQ9P0W2 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
HMG20BQ9P0W2 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HMG20BQ9P0W2 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMG20BQ9P0W2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC22.52■■□□□ 1.2
HMG20BQ9P0W2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC22.52■■□□□ 1.2
HMG20BQ9P0W2 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HMG20BQ9P0W2 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
HMG20BQ9P0W2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC22.52■■□□□ 1.2
HMG20BQ9P0W2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMG20BQ9P0W2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC22.52■■□□□ 1.2
HMG20BQ9P0W2 KRT18P41-201ENST00000518924 1277 ntBASIC22.52■■□□□ 1.2
HMG20BQ9P0W2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms