Protein–RNA interactions for Protein: Q9NZR2

LRP1B, Low-density lipoprotein receptor-related protein 1B, humanhuman

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1BQ9NZR2 LINC01521-201ENST00000504184 1943 ntBASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 UPF3AP3-201ENST00000420996 769 ntBASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 FAM197Y3-203ENST00000618346 717 ntBASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 UNC93B6-202ENST00000528242 690 ntBASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 COA5-202ENST00000409997 557 ntTSL 4 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 SCARNA2-201ENST00000458748 420 ntBASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 AL356488.2-201ENST00000602755 427 ntBASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 AL138831.2-201ENST00000606564 490 ntBASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC11.75□□□□□ -0.53
LRP1BQ9NZR2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 TP73-202ENST00000354437 2140 ntTSL 5 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 RNA5SP415-201ENST00000517246 115 ntBASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 GUSBP12-201ENST00000513727 720 ntBASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 AL357033.4-201ENST00000617703 1807 ntBASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 RPS2P1-201ENST00000434010 821 ntBASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 CYMP-203ENST00000474680 1263 ntBASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 MIR3197-201ENST00000582241 73 ntBASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
LRP1BQ9NZR2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC11.73□□□□□ -0.53
LRP1BQ9NZR2 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
LRP1BQ9NZR2 KATNBL1P6-202ENST00000562413 1466 ntBASIC11.73□□□□□ -0.53
LRP1BQ9NZR2 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC11.73□□□□□ -0.53
LRP1BQ9NZR2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
LRP1BQ9NZR2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC11.73□□□□□ -0.53
LRP1BQ9NZR2 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LRP1BQ9NZR2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
LRP1BQ9NZR2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms