Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 AC026271.3-201ENST00000571884 352 ntBASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SLC52A3Q9NQ40 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 AP000593.1-201ENST00000393668 712 ntBASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 MESTP1-201ENST00000404287 994 ntBASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC52A3Q9NQ40 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 GMCL1P1-201ENST00000463439 1581 ntBASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 AP002982.1-201ENST00000492365 877 ntBASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 AC012317.2-201ENST00000623305 2251 ntBASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 PP12613-201ENST00000424958 2230 ntBASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 KRT16P1-201ENST00000399124 1418 ntBASIC17.55■□□□□ 0.4
SLC52A3Q9NQ40 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 FZD10-202ENST00000539839 3282 ntBASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 SIRPAP1-201ENST00000448467 1770 ntBASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 AL023284.2-201ENST00000405850 579 ntBASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC52A3Q9NQ40 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 AC108860.2-201ENST00000562760 2183 ntBASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SLC52A3Q9NQ40 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms