Protein–RNA interactions for Protein: Q9H4Q4

PRDM12, PR domain zinc finger protein 12, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM12Q9H4Q4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 PMS2P2-201ENST00000425039 1128 ntBASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 RPL13AP23-201ENST00000480739 586 ntBASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 AC009065.1-201ENST00000564055 1225 ntBASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 AC027796.2-201ENST00000575326 344 ntBASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 MIR3180-5-201ENST00000583743 153 ntBASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC20.08■□□□□ 0.81
PRDM12Q9H4Q4 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.08■□□□□ 0.8
PRDM12Q9H4Q4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRDM12Q9H4Q4 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRDM12Q9H4Q4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.08■□□□□ 0.8
PRDM12Q9H4Q4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.08■□□□□ 0.8
PRDM12Q9H4Q4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PRDM12Q9H4Q4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 AF186996.4-201ENST00000467186 377 ntBASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 AP003733.1-201ENST00000491725 852 ntBASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PRDM12Q9H4Q4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 AL390719.2-201ENST00000606993 987 ntBASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 NSUN5P1-202ENST00000421140 1535 ntBASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 NSUN5P2-203ENST00000457352 1529 ntBASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.06■□□□□ 0.8
PRDM12Q9H4Q4 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.05■□□□□ 0.8
PRDM12Q9H4Q4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms