Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCX3BQ9H321 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VCX3BQ9H321 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.68■□□□□ 0.42
VCX3BQ9H321 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.68■□□□□ 0.42
VCX3BQ9H321 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.68■□□□□ 0.42
VCX3BQ9H321 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCX3BQ9H321 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.68■□□□□ 0.42
VCX3BQ9H321 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
VCX3BQ9H321 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCX3BQ9H321 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VCX3BQ9H321 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.68■□□□□ 0.42
VCX3BQ9H321 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VCX3BQ9H321 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
VCX3BQ9H321 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
VCX3BQ9H321 AC093677.2-201ENST00000600169 1863 ntBASIC17.68■□□□□ 0.42
VCX3BQ9H321 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC17.68■□□□□ 0.42
VCX3BQ9H321 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCX3BQ9H321 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCX3BQ9H321 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCX3BQ9H321 AL121761.2-201ENST00000598007 1648 ntBASIC17.68■□□□□ 0.42
VCX3BQ9H321 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCX3BQ9H321 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
VCX3BQ9H321 FLJ13224-201ENST00000313737 1514 ntBASIC17.67■□□□□ 0.42
VCX3BQ9H321 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VCX3BQ9H321 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
VCX3BQ9H321 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.67■□□□□ 0.42
VCX3BQ9H321 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCX3BQ9H321 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCX3BQ9H321 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
VCX3BQ9H321 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
VCX3BQ9H321 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCX3BQ9H321 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VCX3BQ9H321 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VCX3BQ9H321 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC17.67■□□□□ 0.42
VCX3BQ9H321 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VCX3BQ9H321 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.67■□□□□ 0.42
VCX3BQ9H321 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC17.67■□□□□ 0.42
VCX3BQ9H321 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCX3BQ9H321 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCX3BQ9H321 AL023806.1-201ENST00000603994 1649 ntBASIC17.67■□□□□ 0.42
VCX3BQ9H321 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VCX3BQ9H321 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VCX3BQ9H321 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VCX3BQ9H321 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
VCX3BQ9H321 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.67■□□□□ 0.42
VCX3BQ9H321 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VCX3BQ9H321 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCX3BQ9H321 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.67■□□□□ 0.42
VCX3BQ9H321 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
VCX3BQ9H321 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
VCX3BQ9H321 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3BQ9H321 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
VCX3BQ9H321 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3BQ9H321 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.66■□□□□ 0.42
VCX3BQ9H321 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
VCX3BQ9H321 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.66■□□□□ 0.42
VCX3BQ9H321 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.66■□□□□ 0.42
VCX3BQ9H321 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3BQ9H321 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.66■□□□□ 0.42
VCX3BQ9H321 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC17.66■□□□□ 0.42
VCX3BQ9H321 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3BQ9H321 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.66■□□□□ 0.42
VCX3BQ9H321 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.66■□□□□ 0.42
VCX3BQ9H321 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3BQ9H321 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3BQ9H321 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3BQ9H321 AC011676.5-201ENST00000624864 2660 ntBASIC17.66■□□□□ 0.42
VCX3BQ9H321 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
VCX3BQ9H321 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.66■□□□□ 0.42
VCX3BQ9H321 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3BQ9H321 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3BQ9H321 NF2-208ENST00000403435 2568 ntTSL 5 BASIC17.66■□□□□ 0.42
VCX3BQ9H321 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3BQ9H321 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3BQ9H321 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.66■□□□□ 0.42
VCX3BQ9H321 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.66■□□□□ 0.42
VCX3BQ9H321 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3BQ9H321 TFP1-202ENST00000475455 1573 ntBASIC17.66■□□□□ 0.42
VCX3BQ9H321 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3BQ9H321 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VCX3BQ9H321 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3BQ9H321 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
VCX3BQ9H321 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
VCX3BQ9H321 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3BQ9H321 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.65■□□□□ 0.42
VCX3BQ9H321 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.65■□□□□ 0.42
VCX3BQ9H321 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.65■□□□□ 0.42
VCX3BQ9H321 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.65■□□□□ 0.42
VCX3BQ9H321 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3BQ9H321 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
VCX3BQ9H321 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3BQ9H321 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3BQ9H321 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.65■□□□□ 0.42
VCX3BQ9H321 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3BQ9H321 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3BQ9H321 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3BQ9H321 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VCX3BQ9H321 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.65■□□□□ 0.42
VCX3BQ9H321 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.65■□□□□ 0.42
VCX3BQ9H321 AL591742.1-201ENST00000604433 565 ntBASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms