Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 AL163051.1-201ENST00000569214 1512 ntBASIC19.2■□□□□ 0.66
RNF38Q9H0F5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF38Q9H0F5 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 Z83836.1-201ENST00000624605 1642 ntBASIC19.19■□□□□ 0.66
RNF38Q9H0F5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 AC005332.3-201ENST00000589904 676 ntBASIC19.19■□□□□ 0.66
RNF38Q9H0F5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RNF38Q9H0F5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 AP003733.1-201ENST00000491725 852 ntBASIC19.18■□□□□ 0.66
RNF38Q9H0F5 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 AP002414.4-201ENST00000589764 1148 ntBASIC19.18■□□□□ 0.66
RNF38Q9H0F5 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF38Q9H0F5 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 CHCHD2P8-201ENST00000429873 447 ntBASIC19.17■□□□□ 0.66
RNF38Q9H0F5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF38Q9H0F5 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF38Q9H0F5 AP000593.1-201ENST00000393668 712 ntBASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms