Protein–RNA interactions for Protein: Q9BRK5

SDF4, 45 kDa calcium-binding protein, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4Q9BRK5 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 AL390961.4-201ENST00000623958 2535 ntBASIC21.55■■□□□ 1.04
SDF4Q9BRK5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 TSPY21P-201ENST00000433481 731 ntBASIC21.55■■□□□ 1.04
SDF4Q9BRK5 KRT18P57-201ENST00000443599 1254 ntBASIC21.55■■□□□ 1.04
SDF4Q9BRK5 ATP5G1P1-201ENST00000448724 379 ntBASIC21.55■■□□□ 1.04
SDF4Q9BRK5 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
SDF4Q9BRK5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SDF4Q9BRK5 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SDF4Q9BRK5 AC018470.1-201ENST00000624790 3129 ntBASIC21.54■■□□□ 1.04
SDF4Q9BRK5 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SDF4Q9BRK5 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SDF4Q9BRK5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
SDF4Q9BRK5 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
SDF4Q9BRK5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
SDF4Q9BRK5 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
SDF4Q9BRK5 HMGA1P5-201ENST00000412453 271 ntBASIC21.54■■□□□ 1.04
SDF4Q9BRK5 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.54■■□□□ 1.04
SDF4Q9BRK5 AC007663.1-201ENST00000438948 1240 ntBASIC21.54■■□□□ 1.04
SDF4Q9BRK5 AL023803.3-201ENST00000615559 522 ntBASIC21.54■■□□□ 1.04
SDF4Q9BRK5 AC010653.2-201ENST00000623505 997 ntBASIC21.54■■□□□ 1.04
SDF4Q9BRK5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.54■■□□□ 1.04
SDF4Q9BRK5 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC21.54■■□□□ 1.04
SDF4Q9BRK5 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
SDF4Q9BRK5 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.54■■□□□ 1.04
SDF4Q9BRK5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 TSPY23P-201ENST00000440136 739 ntBASIC21.53■■□□□ 1.04
SDF4Q9BRK5 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 AL353719.1-201ENST00000566847 864 ntBASIC21.53■■□□□ 1.04
SDF4Q9BRK5 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 AC092338.2-201ENST00000568827 1415 ntBASIC21.53■■□□□ 1.04
SDF4Q9BRK5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC21.53■■□□□ 1.04
SDF4Q9BRK5 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 AC010203.1-204ENST00000548782 407 ntBASIC21.52■■□□□ 1.04
SDF4Q9BRK5 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 AC073508.3-201ENST00000619697 1419 ntBASIC21.52■■□□□ 1.04
SDF4Q9BRK5 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
SDF4Q9BRK5 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms