Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHOX2BQ99453 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PHOX2BQ99453 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PHOX2BQ99453 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PHOX2BQ99453 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHOX2BQ99453 KRT18P3-201ENST00000451602 1288 ntBASIC18.72■□□□□ 0.59
PHOX2BQ99453 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PHOX2BQ99453 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
PHOX2BQ99453 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.72■□□□□ 0.59
PHOX2BQ99453 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.72■□□□□ 0.59
PHOX2BQ99453 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHOX2BQ99453 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.72■□□□□ 0.59
PHOX2BQ99453 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.72■□□□□ 0.59
PHOX2BQ99453 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.72■□□□□ 0.59
PHOX2BQ99453 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHOX2BQ99453 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHOX2BQ99453 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHOX2BQ99453 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHOX2BQ99453 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHOX2BQ99453 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PHOX2BQ99453 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHOX2BQ99453 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.71■□□□□ 0.59
PHOX2BQ99453 AL512408.1-201ENST00000569378 2000 ntBASIC18.71■□□□□ 0.59
PHOX2BQ99453 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHOX2BQ99453 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.71■□□□□ 0.59
PHOX2BQ99453 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
PHOX2BQ99453 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHOX2BQ99453 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHOX2BQ99453 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHOX2BQ99453 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.71■□□□□ 0.59
PHOX2BQ99453 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC18.71■□□□□ 0.59
PHOX2BQ99453 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHOX2BQ99453 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC18.71■□□□□ 0.59
PHOX2BQ99453 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.71■□□□□ 0.59
PHOX2BQ99453 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHOX2BQ99453 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHOX2BQ99453 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHOX2BQ99453 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHOX2BQ99453 SYS1-203ENST00000414310 795 ntTSL 3 BASIC18.71■□□□□ 0.59
PHOX2BQ99453 SERPINA7P1-201ENST00000443077 631 ntBASIC18.71■□□□□ 0.59
PHOX2BQ99453 PAWRP1-201ENST00000451083 565 ntBASIC18.71■□□□□ 0.59
PHOX2BQ99453 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.71■□□□□ 0.59
PHOX2BQ99453 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.71■□□□□ 0.59
PHOX2BQ99453 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.71■□□□□ 0.59
PHOX2BQ99453 AC124864.1-201ENST00000623408 392 ntBASIC18.71■□□□□ 0.59
PHOX2BQ99453 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PHOX2BQ99453 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHOX2BQ99453 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHOX2BQ99453 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHOX2BQ99453 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PHOX2BQ99453 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PHOX2BQ99453 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
PHOX2BQ99453 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.58
PHOX2BQ99453 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.71■□□□□ 0.58
PHOX2BQ99453 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHOX2BQ99453 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHOX2BQ99453 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.7■□□□□ 0.58
PHOX2BQ99453 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHOX2BQ99453 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHOX2BQ99453 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PHOX2BQ99453 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PHOX2BQ99453 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.7■□□□□ 0.58
PHOX2BQ99453 PMP22-202ENST00000395936 816 ntTSL 3 BASIC18.7■□□□□ 0.58
PHOX2BQ99453 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHOX2BQ99453 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.7■□□□□ 0.58
PHOX2BQ99453 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PHOX2BQ99453 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHOX2BQ99453 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
PHOX2BQ99453 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.7■□□□□ 0.58
PHOX2BQ99453 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.7■□□□□ 0.58
PHOX2BQ99453 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC18.7■□□□□ 0.58
PHOX2BQ99453 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.7■□□□□ 0.58
PHOX2BQ99453 AL592071.1-201ENST00000611956 408 ntBASIC18.7■□□□□ 0.58
PHOX2BQ99453 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.7■□□□□ 0.58
PHOX2BQ99453 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHOX2BQ99453 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
PHOX2BQ99453 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHOX2BQ99453 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PHOX2BQ99453 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PHOX2BQ99453 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PHOX2BQ99453 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PHOX2BQ99453 MIR770-201ENST00000390219 98 ntBASIC18.69■□□□□ 0.58
PHOX2BQ99453 AC211486.1-202ENST00000416371 468 ntBASIC18.69■□□□□ 0.58
PHOX2BQ99453 AL591424.1-201ENST00000442569 1213 ntBASIC18.69■□□□□ 0.58
PHOX2BQ99453 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.69■□□□□ 0.58
PHOX2BQ99453 AC211476.1-201ENST00000503899 468 ntBASIC18.69■□□□□ 0.58
PHOX2BQ99453 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
PHOX2BQ99453 AC040169.1-201ENST00000565382 521 ntBASIC18.69■□□□□ 0.58
PHOX2BQ99453 AL591684.3-201ENST00000605187 298 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms