Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 MIR770-201ENST00000390219 98 ntBASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 IGHGP-201ENST00000390555 1178 ntBASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 ALG1L5P-201ENST00000482043 771 ntBASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 KRT18P28-201ENST00000453838 1332 ntBASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC15.76■□□□□ 0.11
CSMD1Q96PZ7 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 AP001271.2-201ENST00000624018 1556 ntBASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 AL023284.2-201ENST00000405850 579 ntBASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CSMD1Q96PZ7 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 PWWP2AP1-201ENST00000429776 2273 ntBASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 MINOS1P3-201ENST00000457048 203 ntBASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 MIR4469-201ENST00000583919 79 ntBASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CSMD1Q96PZ7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 AC008556.1-201ENST00000610908 2040 ntBASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 POM121L3P-201ENST00000419331 1163 ntBASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CSMD1Q96PZ7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms