Protein–RNA interactions for Protein: Q96PT4

DUX3, Putative double homeobox protein 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX3Q96PT4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.43□□□□□ -0.1
DUX3Q96PT4 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC14.43□□□□□ -0.1
DUX3Q96PT4 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.43□□□□□ -0.1
DUX3Q96PT4 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 NMU-205ENST00000511469 756 ntTSL 3 BASIC14.43□□□□□ -0.1
DUX3Q96PT4 VENTXP5-201ENST00000523979 775 ntBASIC14.43□□□□□ -0.1
DUX3Q96PT4 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
DUX3Q96PT4 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.43□□□□□ -0.1
DUX3Q96PT4 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
DUX3Q96PT4 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC14.43□□□□□ -0.1
DUX3Q96PT4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC14.43□□□□□ -0.1
DUX3Q96PT4 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.43□□□□□ -0.1
DUX3Q96PT4 IER3-202ENST00000376377 1350 ntBASIC14.43□□□□□ -0.1
DUX3Q96PT4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
DUX3Q96PT4 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
DUX3Q96PT4 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX3Q96PT4 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX3Q96PT4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DUX3Q96PT4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX3Q96PT4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX3Q96PT4 AC116562.4-201ENST00000641316 2276 ntBASIC14.42□□□□□ -0.1
DUX3Q96PT4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX3Q96PT4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX3Q96PT4 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DUX3Q96PT4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DUX3Q96PT4 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 AC092597.1-201ENST00000487352 616 ntBASIC14.42□□□□□ -0.1
DUX3Q96PT4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 AL121956.5-201ENST00000625261 221 ntBASIC14.42□□□□□ -0.1
DUX3Q96PT4 AP000550.4-202ENST00000639755 178 ntBASIC14.42□□□□□ -0.1
DUX3Q96PT4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
DUX3Q96PT4 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
DUX3Q96PT4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC14.42□□□□□ -0.1
DUX3Q96PT4 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 AC005332.1-201ENST00000577698 1310 ntBASIC14.41□□□□□ -0.1
DUX3Q96PT4 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 STARP1-201ENST00000397973 869 ntBASIC14.41□□□□□ -0.1
DUX3Q96PT4 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 AC083849.1-201ENST00000615227 514 ntBASIC14.41□□□□□ -0.1
DUX3Q96PT4 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
DUX3Q96PT4 FP475955.4-201ENST00000623131 1990 ntBASIC14.41□□□□□ -0.1
DUX3Q96PT4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
DUX3Q96PT4 AL049812.1-201ENST00000432563 2267 ntBASIC14.41□□□□□ -0.1
DUX3Q96PT4 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms