Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CNTNAP3BQ96NU0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 LINC01006-201ENST00000333319 2292 ntBASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 AC015922.1-201ENST00000421102 1152 ntBASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 CNN2P11-201ENST00000429351 262 ntBASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 GUSBP12-201ENST00000513727 720 ntBASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CNTNAP3BQ96NU0 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 MIR4469-201ENST00000583919 79 ntBASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
CNTNAP3BQ96NU0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 HLA-J-201ENST00000462773 1622 ntBASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 AC012645.4-201ENST00000610691 1061 ntBASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 AC036111.1-201ENST00000533973 1582 ntBASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.66■□□□□ 0.42
CNTNAP3BQ96NU0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.65■□□□□ 0.42
CNTNAP3BQ96NU0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms