Protein–RNA interactions for Protein: Q96NL6

SCLT1, Sodium channel and clathrin linker 1, humanhuman

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1Q96NL6 FP475955.4-201ENST00000623131 1990 ntBASIC20.66■□□□□ 0.9
SCLT1Q96NL6 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCLT1Q96NL6 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SCLT1Q96NL6 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SCLT1Q96NL6 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCLT1Q96NL6 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCLT1Q96NL6 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.66■□□□□ 0.9
SCLT1Q96NL6 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SCLT1Q96NL6 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 FAM86EP-206ENST00000510506 987 ntBASIC20.65■□□□□ 0.9
SCLT1Q96NL6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.65■□□□□ 0.9
SCLT1Q96NL6 AC112497.1-201ENST00000624824 639 ntBASIC20.65■□□□□ 0.9
SCLT1Q96NL6 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 AC093484.2-201ENST00000580996 2166 ntBASIC20.65■□□□□ 0.9
SCLT1Q96NL6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SCLT1Q96NL6 AC008556.1-201ENST00000610908 2040 ntBASIC20.65■□□□□ 0.9
SCLT1Q96NL6 BX323043.1-201ENST00000641006 1765 ntBASIC20.64■□□□□ 0.9
SCLT1Q96NL6 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCLT1Q96NL6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SCLT1Q96NL6 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
SCLT1Q96NL6 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SCLT1Q96NL6 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCLT1Q96NL6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.64■□□□□ 0.89
SCLT1Q96NL6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCLT1Q96NL6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCLT1Q96NL6 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.64■□□□□ 0.89
SCLT1Q96NL6 RASA4DP-201ENST00000460726 1199 ntBASIC20.64■□□□□ 0.89
SCLT1Q96NL6 ZNF444P1-201ENST00000559497 298 ntBASIC20.64■□□□□ 0.89
SCLT1Q96NL6 AC093458.2-201ENST00000623150 629 ntBASIC20.64■□□□□ 0.89
SCLT1Q96NL6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
SCLT1Q96NL6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCLT1Q96NL6 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCLT1Q96NL6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SCLT1Q96NL6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.64■□□□□ 0.89
SCLT1Q96NL6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCLT1Q96NL6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SCLT1Q96NL6 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.64■□□□□ 0.89
SCLT1Q96NL6 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
SCLT1Q96NL6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 HTR7P1-202ENST00000624664 4411 ntBASIC20.63■□□□□ 0.89
SCLT1Q96NL6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 AC020763.4-201ENST00000623414 4170 ntBASIC20.63■□□□□ 0.89
SCLT1Q96NL6 AL109659.2-201ENST00000606809 1674 ntBASIC20.63■□□□□ 0.89
SCLT1Q96NL6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCLT1Q96NL6 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCLT1Q96NL6 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.62■□□□□ 0.89
SCLT1Q96NL6 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCLT1Q96NL6 AC005332.1-201ENST00000577698 1310 ntBASIC20.62■□□□□ 0.89
SCLT1Q96NL6 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
SCLT1Q96NL6 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms