Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 AL512625.2-201ENST00000417533 625 ntBASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 AC133552.2-202ENST00000575694 574 ntBASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP6Q96FZ7 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 BX276092.2-201ENST00000417668 665 ntBASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 PP12613-201ENST00000424958 2230 ntBASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP6Q96FZ7 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 AL050303.2-201ENST00000619798 666 ntBASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CHMP6Q96FZ7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms