Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC18.58■□□□□ 0.57
SIPA1Q96FS4 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.58■□□□□ 0.57
SIPA1Q96FS4 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIPA1Q96FS4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.58■□□□□ 0.57
SIPA1Q96FS4 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.58■□□□□ 0.57
SIPA1Q96FS4 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIPA1Q96FS4 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIPA1Q96FS4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SIPA1Q96FS4 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.58■□□□□ 0.56
SIPA1Q96FS4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIPA1Q96FS4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC18.58■□□□□ 0.56
SIPA1Q96FS4 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SIPA1Q96FS4 AC012615.1-201ENST00000565797 1299 ntBASIC18.58■□□□□ 0.56
SIPA1Q96FS4 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC18.58■□□□□ 0.56
SIPA1Q96FS4 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC18.58■□□□□ 0.56
SIPA1Q96FS4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.58■□□□□ 0.56
SIPA1Q96FS4 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SIPA1Q96FS4 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.58■□□□□ 0.56
SIPA1Q96FS4 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIPA1Q96FS4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SIPA1Q96FS4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIPA1Q96FS4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SIPA1Q96FS4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 FAAHP1-202ENST00000446499 1238 ntBASIC18.57■□□□□ 0.56
SIPA1Q96FS4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 AL121772.3-201ENST00000610840 674 ntBASIC18.57■□□□□ 0.56
SIPA1Q96FS4 AL357033.4-201ENST00000617703 1807 ntBASIC18.57■□□□□ 0.56
SIPA1Q96FS4 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 HEIH-201ENST00000623091 1652 ntBASIC18.57■□□□□ 0.56
SIPA1Q96FS4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.57■□□□□ 0.56
SIPA1Q96FS4 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 IGHGP-201ENST00000390555 1178 ntBASIC18.56■□□□□ 0.56
SIPA1Q96FS4 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 AC104819.1-201ENST00000504587 486 ntBASIC18.56■□□□□ 0.56
SIPA1Q96FS4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 KLK8-205ENST00000593490 267 ntTSL 3 BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC18.56■□□□□ 0.56
SIPA1Q96FS4 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 AC093484.2-201ENST00000580996 2166 ntBASIC18.55■□□□□ 0.56
SIPA1Q96FS4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 AC007952.6-201ENST00000573168 2673 ntBASIC18.55■□□□□ 0.56
SIPA1Q96FS4 AC003957.1-201ENST00000625108 2673 ntBASIC18.55■□□□□ 0.56
SIPA1Q96FS4 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 TSPY19P-201ENST00000418461 509 ntBASIC18.55■□□□□ 0.56
SIPA1Q96FS4 AC246785.2-201ENST00000432512 513 ntBASIC18.55■□□□□ 0.56
SIPA1Q96FS4 TSPY18P-201ENST00000441642 509 ntBASIC18.55■□□□□ 0.56
SIPA1Q96FS4 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 AC091304.2-201ENST00000564639 760 ntBASIC18.55■□□□□ 0.56
SIPA1Q96FS4 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.55■□□□□ 0.56
SIPA1Q96FS4 LINC01711-201ENST00000598340 967 ntBASIC18.55■□□□□ 0.56
SIPA1Q96FS4 IFNL4P1-201ENST00000607083 540 ntBASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms