Protein–RNA interactions for Protein: Q96EX2

RNFT2, RING finger and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT2Q96EX2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNFT2Q96EX2 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
RNFT2Q96EX2 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
RNFT2Q96EX2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
RNFT2Q96EX2 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.83■□□□□ 0.28
RNFT2Q96EX2 AC092666.2-201ENST00000613287 246 ntBASIC16.83■□□□□ 0.28
RNFT2Q96EX2 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.83■□□□□ 0.28
RNFT2Q96EX2 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 GNAS-203ENST00000306120 1878 ntBASIC16.82■□□□□ 0.28
RNFT2Q96EX2 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 CDCA4P2-201ENST00000441182 718 ntBASIC16.82■□□□□ 0.28
RNFT2Q96EX2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.82■□□□□ 0.28
RNFT2Q96EX2 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.82■□□□□ 0.28
RNFT2Q96EX2 HLA-A-209ENST00000638375 975 ntBASIC16.82■□□□□ 0.28
RNFT2Q96EX2 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 AC134043.2-201ENST00000624206 2238 ntBASIC16.82■□□□□ 0.28
RNFT2Q96EX2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.82■□□□□ 0.28
RNFT2Q96EX2 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 AC026185.1-201ENST00000445748 174 ntBASIC16.81■□□□□ 0.28
RNFT2Q96EX2 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.81■□□□□ 0.28
RNFT2Q96EX2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms