Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM54Q969K7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM54Q969K7 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM54Q969K7 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM54Q969K7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
TMEM54Q969K7 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM54Q969K7 AL162741.1-201ENST00000565563 1558 ntBASIC16.34■□□□□ 0.21
TMEM54Q969K7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.34■□□□□ 0.21
TMEM54Q969K7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
TMEM54Q969K7 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC16.34■□□□□ 0.21
TMEM54Q969K7 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC16.33■□□□□ 0.21
TMEM54Q969K7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM54Q969K7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
TMEM54Q969K7 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM54Q969K7 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM54Q969K7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM54Q969K7 MIR149-201ENST00000384879 89 ntBASIC16.33■□□□□ 0.2
TMEM54Q969K7 SEC1P-202ENST00000473944 940 ntBASIC16.33■□□□□ 0.2
TMEM54Q969K7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.33■□□□□ 0.2
TMEM54Q969K7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.33■□□□□ 0.2
TMEM54Q969K7 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM54Q969K7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM54Q969K7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM54Q969K7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM54Q969K7 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
TMEM54Q969K7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM54Q969K7 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM54Q969K7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM54Q969K7 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM54Q969K7 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM54Q969K7 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM54Q969K7 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM54Q969K7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM54Q969K7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM54Q969K7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM54Q969K7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.33■□□□□ 0.2
TMEM54Q969K7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM54Q969K7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
TMEM54Q969K7 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM54Q969K7 BICD1-207ENST00000551848 1962 ntBASIC16.33■□□□□ 0.2
TMEM54Q969K7 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TMEM54Q969K7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
TMEM54Q969K7 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.33■□□□□ 0.2
TMEM54Q969K7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM54Q969K7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM54Q969K7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM54Q969K7 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM54Q969K7 AP000523.1-201ENST00000398242 1049 ntBASIC16.32■□□□□ 0.2
TMEM54Q969K7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM54Q969K7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM54Q969K7 AC211429.1-201ENST00000415277 523 ntBASIC16.32■□□□□ 0.2
TMEM54Q969K7 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM54Q969K7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
TMEM54Q969K7 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
TMEM54Q969K7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEM54Q969K7 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
TMEM54Q969K7 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM54Q969K7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM54Q969K7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM54Q969K7 AC010203.1-204ENST00000548782 407 ntBASIC16.32■□□□□ 0.2
TMEM54Q969K7 AC009065.1-201ENST00000564055 1225 ntBASIC16.32■□□□□ 0.2
TMEM54Q969K7 AC010240.3-201ENST00000607688 395 ntBASIC16.32■□□□□ 0.2
TMEM54Q969K7 AC024243.1-201ENST00000609234 778 ntBASIC16.32■□□□□ 0.2
TMEM54Q969K7 AC009102.3-201ENST00000623118 1491 ntBASIC16.32■□□□□ 0.2
TMEM54Q969K7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
TMEM54Q969K7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC16.32■□□□□ 0.2
TMEM54Q969K7 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.32■□□□□ 0.2
TMEM54Q969K7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
TMEM54Q969K7 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.32■□□□□ 0.2
TMEM54Q969K7 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM54Q969K7 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM54Q969K7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM54Q969K7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM54Q969K7 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM54Q969K7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM54Q969K7 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM54Q969K7 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM54Q969K7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM54Q969K7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM54Q969K7 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM54Q969K7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM54Q969K7 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM54Q969K7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM54Q969K7 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM54Q969K7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM54Q969K7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM54Q969K7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM54Q969K7 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM54Q969K7 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM54Q969K7 AC005363.2-201ENST00000618631 242 ntBASIC16.31■□□□□ 0.2
TMEM54Q969K7 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC16.31■□□□□ 0.2
TMEM54Q969K7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM54Q969K7 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
TMEM54Q969K7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.31■□□□□ 0.2
TMEM54Q969K7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM54Q969K7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.31■□□□□ 0.2
TMEM54Q969K7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM54Q969K7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM54Q969K7 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TMEM54Q969K7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms