Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP9XQ93008 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP9XQ93008 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.1■□□□□ 0.17
USP9XQ93008 PTMS-202ENST00000389462 773 ntTSL 2 BASIC16.1■□□□□ 0.17
USP9XQ93008 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC16.1■□□□□ 0.17
USP9XQ93008 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.1■□□□□ 0.17
USP9XQ93008 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC16.1■□□□□ 0.17
USP9XQ93008 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.1■□□□□ 0.17
USP9XQ93008 AL139288.1-201ENST00000623748 933 ntBASIC16.1■□□□□ 0.17
USP9XQ93008 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC16.1■□□□□ 0.17
USP9XQ93008 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.1■□□□□ 0.17
USP9XQ93008 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
USP9XQ93008 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP9XQ93008 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.1■□□□□ 0.17
USP9XQ93008 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.1■□□□□ 0.17
USP9XQ93008 AL356309.3-201ENST00000624132 1934 ntBASIC16.1■□□□□ 0.17
USP9XQ93008 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP9XQ93008 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
USP9XQ93008 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.1■□□□□ 0.17
USP9XQ93008 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
USP9XQ93008 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.1■□□□□ 0.17
USP9XQ93008 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.1■□□□□ 0.17
USP9XQ93008 AC105339.3-201ENST00000560043 636 ntBASIC16.1■□□□□ 0.17
USP9XQ93008 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC16.1■□□□□ 0.17
USP9XQ93008 AC093028.1-201ENST00000622998 982 ntBASIC16.1■□□□□ 0.17
USP9XQ93008 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.1■□□□□ 0.17
USP9XQ93008 RCC2P3-201ENST00000418112 1537 ntBASIC16.1■□□□□ 0.17
USP9XQ93008 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
USP9XQ93008 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
USP9XQ93008 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP9XQ93008 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.09■□□□□ 0.17
USP9XQ93008 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
USP9XQ93008 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP9XQ93008 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
USP9XQ93008 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
USP9XQ93008 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.09■□□□□ 0.17
USP9XQ93008 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.09■□□□□ 0.17
USP9XQ93008 CENPM-204ENST00000402420 688 ntTSL 5 BASIC16.09■□□□□ 0.17
USP9XQ93008 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.09■□□□□ 0.17
USP9XQ93008 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.09■□□□□ 0.17
USP9XQ93008 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.09■□□□□ 0.17
USP9XQ93008 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC16.09■□□□□ 0.17
USP9XQ93008 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP9XQ93008 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP9XQ93008 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
USP9XQ93008 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
USP9XQ93008 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.09■□□□□ 0.17
USP9XQ93008 AC073314.1-201ENST00000568729 2216 ntBASIC16.09■□□□□ 0.17
USP9XQ93008 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP9XQ93008 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
USP9XQ93008 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP9XQ93008 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP9XQ93008 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.09■□□□□ 0.17
USP9XQ93008 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
USP9XQ93008 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.09■□□□□ 0.17
USP9XQ93008 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP9XQ93008 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
USP9XQ93008 INTS4P1-201ENST00000438455 1935 ntBASIC16.09■□□□□ 0.17
USP9XQ93008 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
USP9XQ93008 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
USP9XQ93008 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
USP9XQ93008 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
USP9XQ93008 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
USP9XQ93008 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
USP9XQ93008 LINC01521-201ENST00000504184 1943 ntBASIC16.08■□□□□ 0.17
USP9XQ93008 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.17
USP9XQ93008 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
USP9XQ93008 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.08■□□□□ 0.17
USP9XQ93008 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.08■□□□□ 0.17
USP9XQ93008 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.08■□□□□ 0.17
USP9XQ93008 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.08■□□□□ 0.17
USP9XQ93008 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC16.08■□□□□ 0.17
USP9XQ93008 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.08■□□□□ 0.17
USP9XQ93008 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
USP9XQ93008 AF228730.6-201ENST00000641497 218 ntBASIC16.08■□□□□ 0.17
USP9XQ93008 AC084121.3-201ENST00000641716 218 ntBASIC16.08■□□□□ 0.17
USP9XQ93008 AC105233.6-201ENST00000642093 218 ntBASIC16.08■□□□□ 0.17
USP9XQ93008 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.17
USP9XQ93008 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
USP9XQ93008 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
USP9XQ93008 AC092667.1-201ENST00000434301 2586 ntBASIC16.08■□□□□ 0.16
USP9XQ93008 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
USP9XQ93008 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
USP9XQ93008 REEP1-209ENST00000541910 969 ntTSL 2 BASIC16.08■□□□□ 0.16
USP9XQ93008 AC005829.1-201ENST00000570002 483 ntBASIC16.08■□□□□ 0.16
USP9XQ93008 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC16.08■□□□□ 0.16
USP9XQ93008 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.08■□□□□ 0.16
USP9XQ93008 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
USP9XQ93008 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.08■□□□□ 0.16
USP9XQ93008 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
USP9XQ93008 CYP51A1P1-201ENST00000492267 1507 ntBASIC16.07■□□□□ 0.16
USP9XQ93008 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
USP9XQ93008 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
USP9XQ93008 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.07■□□□□ 0.16
USP9XQ93008 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.07■□□□□ 0.16
USP9XQ93008 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.07■□□□□ 0.16
USP9XQ93008 AC022494.1-201ENST00000466044 728 ntBASIC16.07■□□□□ 0.16
USP9XQ93008 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC16.07■□□□□ 0.16
USP9XQ93008 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.07■□□□□ 0.16
USP9XQ93008 AC011467.4-201ENST00000594891 528 ntBASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms