Protein–RNA interactions for Protein: Q8WXH0

SYNE2, Nesprin-2, humanhuman

Known RBP Predictions only

Length 6,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2Q8WXH0 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AL353135.1-201ENST00000606729 504 ntBASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SYNE2Q8WXH0 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 CRYGEP-201ENST00000412192 528 ntBASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 AC068472.1-201ENST00000474589 881 ntBASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 AC112777.1-201ENST00000540175 1423 ntBASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 AC020907.1-201ENST00000616460 1350 ntBASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 AC253536.4-201ENST00000440539 267 ntBASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 KRT8P44-201ENST00000441609 1350 ntBASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 AC005229.4-201ENST00000610085 2198 ntBASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC7.47□□□□□ -1.21
SYNE2Q8WXH0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 U62317.3-201ENST00000608319 855 ntBASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 AL512384.1-201ENST00000406683 331 ntBASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 AC067863.1-201ENST00000494933 530 ntBASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 PC-214ENST00000628663 1470 ntTSL 5 BASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.21
SYNE2Q8WXH0 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SYNE2Q8WXH0 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC7.46□□□□□ -1.22
SYNE2Q8WXH0 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SYNE2Q8WXH0 DDX43P3-201ENST00000441064 443 ntBASIC7.46□□□□□ -1.22
SYNE2Q8WXH0 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC7.46□□□□□ -1.22
SYNE2Q8WXH0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
SYNE2Q8WXH0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SYNE2Q8WXH0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
SYNE2Q8WXH0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC7.46□□□□□ -1.22
SYNE2Q8WXH0 GCA-201ENST00000233612 1694 ntTSL 2 BASIC7.46□□□□□ -1.22
SYNE2Q8WXH0 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC7.46□□□□□ -1.22
SYNE2Q8WXH0 AC007541.1-201ENST00000570282 1469 ntBASIC7.46□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms