Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 AC104417.2-201ENST00000562989 1793 ntBASIC12.54□□□□□ -0.4
COPS9Q8WXC6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 MCRIP2P1-201ENST00000394346 511 ntBASIC12.54□□□□□ -0.4
COPS9Q8WXC6 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 AL162412.1-201ENST00000567129 965 ntBASIC12.54□□□□□ -0.4
COPS9Q8WXC6 MIR4466-201ENST00000606121 54 ntBASIC12.54□□□□□ -0.4
COPS9Q8WXC6 AC104187.1-201ENST00000607510 612 ntBASIC12.54□□□□□ -0.4
COPS9Q8WXC6 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 AC100791.3-201ENST00000617619 330 ntBASIC12.54□□□□□ -0.4
COPS9Q8WXC6 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.54□□□□□ -0.4
COPS9Q8WXC6 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 AC012313.1-201ENST00000593393 3059 ntBASIC12.53□□□□□ -0.4
COPS9Q8WXC6 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 YBX1P1-201ENST00000445822 960 ntBASIC12.53□□□□□ -0.4
COPS9Q8WXC6 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 AC124067.4-201ENST00000519691 2379 ntBASIC12.53□□□□□ -0.4
COPS9Q8WXC6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
COPS9Q8WXC6 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COPS9Q8WXC6 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COPS9Q8WXC6 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COPS9Q8WXC6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC12.52□□□□□ -0.4
COPS9Q8WXC6 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COPS9Q8WXC6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC12.52□□□□□ -0.4
COPS9Q8WXC6 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COPS9Q8WXC6 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
COPS9Q8WXC6 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
COPS9Q8WXC6 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms